Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2113g00002 ATGGCTCTCCAACTTCAAGCATTGTTATTAATTGGGCTTGCCATTGCAAGCCTCGTCTCAGCAGCTTCTGCTATTTCTGGAACTGCTACCTTTTATACTGTATATGTTCCGTCTGCATGCAATGGATTCCAAAACGACGGAGTTATGATCGCCGCCGCGAGCGACTCGCTCTGGGACAACGGAGCTGCATGTGGAAGAAAGTACAGAGTGAGGTGCGCCAGCGGTACCAACCAAGGCGTGGCTAACCCTTGCCGGGGTGGAGCCGTCACCGTCAAGATTGTCGATCGCTGCCCTCCTCCGGCATGCAGAGGAACCATCGATCTCTCCCGTGAAGCTTTCTCTGCCATCGCCGACCCTAACGAAGGAAAAATCAACATTGAATTCACCCAGTAA 393 0.5242 MALQLQALLLIGLAIASLVSAASAISGTATFYTVYVPSACNGFQNDGVMIAAASDSLWDNGAACGRKYRVRCASGTNQGVANPCRGGAVTVKIVDRCPPPACRGTIDLSREAFSAIADPNEGKINIEFTQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2113g00002 130 CDD DPBB_EG45-like 25 129 - -
Pral2113g00002 130 SUPERFAMILY Barwin-like endoglucanases 15 130 IPR036908 -
Pral2113g00002 130 SMART dpbb_1 50 128 IPR007112 -
Pral2113g00002 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 130 IPR044206 GO:0009627|GO:0048046
Pral2113g00002 130 FunFam Barwin-related endoglucanase 24 130 - -
Pral2113g00002 130 Pfam Lytic transglycolase 51 128 IPR009009 -
Pral2113g00002 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 130 IPR007112 -
Pral2113g00002 130 Gene3D - 23 130 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2113g00002 Pral-Chr2113 13345 14074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2113g00002 49 121 Expansin Gene Family AT2G45110 37.662 3.19e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2113g00002 - - pop:7493352 176.792