Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2113g00001 ATGGCCCCCAACATGAACTCAGTGCTTGTCGTGTTGGCCATCGCAAGCCTTGTTTCAGTGGCATCTGCCATTTCTGGAACTGCCACATTTTACACCAAATTAACTCCTTCTGCGTGCTTTGAGGGCCGAAACGAGGGCACGATGGTGGCAGCGGCGAGCAAGTCGATCTGGGAGAATGGAGCTGCATGTGGAAGAAGGTACAGAGTCCGATGCACCGGCGGTACCACCGGCGGTGTGGCTCACCCTTGCCGGGGTGGAAGCGTTACCGTCAAGATTGTGGATCTCTGCTTAGACTGCCAAGGAACCATCGATCTCTCTCGTCAAGCTTTCTCTCACATCGCTAACCCTGTCGAAGGAAAAATCCGCATTGACTTCACCCAGTAA 384 0.5391 MAPNMNSVLVVLAIASLVSVASAISGTATFYTKLTPSACFEGRNEGTMVAAASKSIWENGAACGRRYRVRCTGGTTGGVAHPCRGGSVTVKIVDLCLDCQGTIDLSRQAFSHIANPVEGKIRIDFTQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2113g00001 127 CDD DPBB_EG45-like 24 126 - -
Pral2113g00001 127 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 7 127 IPR044206 GO:0009627|GO:0048046
Pral2113g00001 127 FunFam Barwin-related endoglucanase 23 127 - -
Pral2113g00001 127 Gene3D - 14 127 IPR036908 -
Pral2113g00001 127 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 127 IPR007112 -
Pral2113g00001 127 Pfam Lytic transglycolase 50 124 IPR009009 -
Pral2113g00001 127 SUPERFAMILY Barwin-like endoglucanases 12 126 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2113g00001 Pral-Chr2113 4688 5190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2113g00001 48 127 Expansin Gene Family AT2G45110 34.409 3.65e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2113g00001 - - qsu:112015559 140.584