Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2112g00011 ATGAGCCTCAGCCACAGCCATAGCCACGACGAGACCACCACCACCACGGCGACAACCGCGAAGCTCGACGACGGCCACGAGCTCGACATGGTGATGCCGGGCTTCCGATTTCACCCCACAGAAGAAGAACTCGTGGAGTTCTATCTTCGCCGTAAGGTTGAGGGAAAGCGATTCAACGTTGAGCTCATTACTTTTCTTGATCTTTATCGCTATGACCCCTGGGAGCTTCCAGCCATGGCGGCGATTGGTGAGAAGGAATGGTACTTTTATGTTCCGAGAGATCGGAAGTATCGCAACGGCGATCGGCCGAACCGCGTAACGAAGACGGGGTACTGGAAAGCCACCGGAGCTGATAGAATGATCAGAACTGAGAATTTCAAGTCAATTGGGCTCAAGAAAACCCTAGTTTTCTACTCTGGTAAAGCTCCCAAAGGTATCAGAACCAGTTGGATCATGAACGAATATCGCTTGCCTCACCATGACACTGAACGATACCAAAAGGCTGAGATATCACTGTGTCGAGTGTACAAAAGACCAGGAGTCGAAGACCATCCTTCACTTCCTCGTTGTCTGCCAACCAGGCCATCTTCTTCCCCCAGAGCTTCTTCACATTCTTCAGACAAGAGCATCAGTAAGCAGCACAACAACGAAACGTTTCATCATCAACATCATCAGATCAACAACATAGAATTTGGGGGACAAAGTACGATGATGAATAACTTTAATCATCATCATCATCGAATGCAGGATCAGTTTGGAAAAACCTCCTCTTCAGATAATAATATCAATCAAGGGGTCTCAATATCTCTTGGGCTTTCCAAACAAAGCAACCCTCCTTTTACTTACCCTAATAATTCTTCCTCAGCTCCAACAATGGTTCCTCCATTTCCACTCATTGAGGACGAAGAGTTACTGATGCTCACAAATATGCAGCCACTGATAATGAAGCAAGCTCAAGCTTCTTCCTCCTTCTTCCTCACACCGCCACCTGGTAACAATAACAACAATTCTTCTTCTTCAGCTTCTTCGCCAAATGTCATGGAGGATCTCAACAGGCTGTTGAGTTATAATCAGCTGCAACAATACTTCAACGTTAACAATGCTCCAAGCCATCATCATCATCAACAACAACAATTCTCTAATTTGCTGGTTCAACCTCATCAACCAACGGCTGTGATGATGAGTTCTTCGTCGGCCTTACCAACTTCTTCGCTTCCATTAACGACGACGACAACCACCACCACGACGACCTTCTCAGATAATAATAAACTGTGGGAGTGGAATCTCATCCCTGAGCCAAGTAATAACAGAGAGTACAGCAACATGTCCTTCAAGTAA 1338 0.4604 MSLSHSHSHDETTTTTATTAKLDDGHELDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTKTGYWKATGADRMIRTENFKSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHDTERYQKAEISLCRVYKRPGVEDHPSLPRCLPTRPSSSPRASSHSSDKSISKQHNNETFHHQHHQINNIEFGGQSTMMNNFNHHHHRMQDQFGKTSSSDNNINQGVSISLGLSKQSNPPFTYPNNSSSAPTMVPPFPLIEDEELLMLTNMQPLIMKQAQASSSFFLTPPPGNNNNNSSSSASSPNVMEDLNRLLSYNQLQQYFNVNNAPSHHHHQQQQFSNLLVQPHQPTAVMMSSSSALPTSSLPLTTTTTTTTTTFSDNNKLWEWNLIPEPSNNREYSNMSFK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2112g00011 445 Gene3D NAC domain 40 181 IPR036093 GO:0003677|GO:0006355
Pral2112g00011 445 MobiDBLite consensus disorder prediction 1 21 - -
Pral2112g00011 445 FunFam NAC domain-containing protein 35 40 181 - -
Pral2112g00011 445 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 30 279 - -
Pral2112g00011 445 ProSiteProfiles NAC domain profile. 31 178 IPR003441 GO:0003677|GO:0006355
Pral2112g00011 445 MobiDBLite consensus disorder prediction 1 22 - -
Pral2112g00011 445 MobiDBLite consensus disorder prediction 191 209 - -
Pral2112g00011 445 MobiDBLite consensus disorder prediction 183 213 - -
Pral2112g00011 445 Pfam No apical meristem (NAM) protein 33 157 IPR003441 GO:0003677|GO:0006355
Pral2112g00011 445 MobiDBLite consensus disorder prediction 324 345 - -
Pral2112g00011 445 SUPERFAMILY NAC domain 31 178 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2112g00011 Pral-Chr2112 48328 51457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2112g00011 30 194 NAC Transcription Factor Family AT2G02450 91.515 5.53e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2112g00011 NAM 3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2112g00011 - - pcin:129287140 443.351