Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2109g00004 ATGGAGCAAAGCATCCTATGCAAATACACAGTGCATCACAGTGTTACCAAGAAGCTCGCGAGGCCCAAGGGCTCTGATTTGAGCAATCCCACAGAGCCCCGAGTCGTACGGATATCCGTAACTGATCCGGATGCCACAGACTCCTCCAGCGACGAGGAAGGAGAGTTTCTGGGTCGACCCAGAGTGAAGCGGTATGTGAACCAGATTGACATCGAAACTAGCGCGAGAAACGGGGCCCTCCTCAACAATGCCCGGAAGAGGCCCGCCGGGAGCACCGCTGCTTGCCGTCGGCCGGCAAAGGTTTCCACGGCCAATAACGGCAGGAAGTTCCGAGGCGTGCGGCAAAGACCATGGGGGAAATGGGCGGCGGAGATTCGAGATCCAGCGAGACGAGTACGGCTCTGGTTGGGGACGTATGATACGGCAGAAGAAGCAGCCATGGTGTACGACAACGCGGCGATTAAGCTGCGAGGTCCCGATGCTTTGACGAACTTTGCTACCCCACCGGCGAGGGAGAAGGCCGAGGGGGAAGAAGTAGAAGTGACCGTGAAGCCGGAACTGAAAGTTTCAGTGCAGTCAGAAGCATCCGGTTCGGGATACGATTCGGGAGAGGAGTCTCATAATCTTTGTTCCCCGACATCGGTGCTTCAATTCAGGAGCAATTCGACCGAGGAAGCAGAGCCGGGAAAGGCTACGGAACCATGCGTAGCAGAGGCAGAAAGAGAAGAAACAGGGGAAGAGCCGTCTGGGGAGTGTGAAGGGGAAACAAGTCAAAGGAGGTTGTGGGAGGAGGAGGAATATTGGAGGATAGAGATGCCGGTGTGGGATGATGTGCTGATGAATTTTGAAACGCCAGAATACTCCCCGGTGATGTGGGAAGAACCGTCGCCGTTGTACTGCGAAACAACTGCGCGGGTTATGGCGGAGGAGATTGGAAGCGCGGGGGAGACAGATTGGGAGAGAATGTACTCGCCATCAGGGATGTGCCAGGTGGACGATTTCTTTCAAGACATTTTGTTGGGGTCAGATCCTCTGGTGGCGCTCTGA 1047 0.5568 MEQSILCKYTVHHSVTKKLARPKGSDLSNPTEPRVVRISVTDPDATDSSSDEEGEFLGRPRVKRYVNQIDIETSARNGALLNNARKRPAGSTAACRRPAKVSTANNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFATPPAREKAEGEEVEVTVKPELKVSVQSEASGSGYDSGEESHNLCSPTSVLQFRSNSTEEAEPGKATEPCVAEAEREETGEEPSGECEGETSQRRLWEEEEYWRIEMPVWDDVLMNFETPEYSPVMWEEPSPLYCETTARVMAEEIGSAGETDWERMYSPSGMCQVDDFFQDILLGSDPLVAL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2109g00004 348 CDD AP2 109 166 IPR001471 GO:0003700|GO:0006355
Pral2109g00004 348 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Pral2109g00004 348 SMART rav1_2 109 172 IPR001471 GO:0003700|GO:0006355
Pral2109g00004 348 MobiDBLite consensus disorder prediction 189 227 - -
Pral2109g00004 348 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Pral2109g00004 348 Gene3D AP2/ERF domain 108 167 IPR036955 GO:0003700|GO:0006355
Pral2109g00004 348 FunFam Ethylene-responsive transcription factor 2 108 167 - -
Pral2109g00004 348 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Pral2109g00004 348 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Pral2109g00004 348 MobiDBLite consensus disorder prediction 166 258 - -
Pral2109g00004 348 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 32 248 - -
Pral2109g00004 348 SUPERFAMILY DNA-binding domain 109 166 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2109g00004 Pral-Chr2109 32383 34196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2109g00004 7 225 AP2-EREBP Transcription Factor Family AT4G27950 47.577 4.02e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral2109g00004 AP2 6.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2109g00004 - - pcin:129303306 406.371