Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2108g00007 ATGATACTTAAGCGGAATATGAAAATTGAAATTCCGAACCTGAAGCGATGCCGATTAGAGGAGCTTGATCCTGAAGACAGTATGTGTGCGGCGAATCCCAAGAAACGGAGGGCAAGTTGGTTCTTATCTCCTGGTATGCCCGCTGAGGATGAATATTTGGGCAGGGGTTCTGGATTTCTGTGCAGTAAAGAATCGCATTGCGGTGGTGACTTACGGTCGAACCCAGATTCCACAAAGTCAAATGCTAAAACAGTACTAAAACCGGGCTCAAAAGTGGTTCGGCCTCCATTATTGCGGTCGTCGCGAGGTCGCCAACAGATACTTCCGTCGAGGTTCAGGGATTCGGTTCTTGATTCTTGGAAGAATAAAAGAATCCAAGGGGAGAACACATATTCCAGCTTTGAAGAAGATAAGTTTTTAGGGGAAGATGAGTCGAAGCTCACTGGAATGGAATTTGCAAGACAGGGAGATAATGTTGACTCTAATCTGAAAAATTCAATTTATTATTCCCATACTGAAATGGAGAAGGAAAAAGTCTTGGGTGCCTTAGACTCGAGTGATTTCGACGCCGCGGACACGGAGCATATGAAGTCCTTTAGTACCGTGAGAACAACAGTTAAAGAGAGTTGTTCATCGTTAGTTGAATCTCAGAATTATGCGTCGAGACTTAATTCTGAATGCGTTAACCCGAAGACTAATGGGAAAGCTGAAAAGAGGGTAGACATTTACAAACTAGAGGATTTTGCTTGGGGTGACATAGTTTGGGCAAAATGCGGGAAGAGGTATCCGGCTTGGCCTGCGGTAGTGATTGATCCCATCTTGCAAGCTCCCAAATCAGTCCTCAACTGTTGTGTTCCAGGTGCAATTTGCGTGATGTTTTTTGGGTACTCAAAAAAAGGAAAGCAAAGGGACTATGCATGGGTGAGGCAGGGTATGGTATTCCCCTTCATGGAATTCATGGAGAGATTTCAGAGGCAGACTCGGCTGTACAGGAGCAAACCAAGTGACTTTCGAATGGCGTTAGAGGAGGCTTTGTTGGCAGAAGATGGTATTCTGGACTCACATTTGGGAGCAGAGATTACTACTAAAAGTAACGTTGAAGCTCATCCCAGTGCAGATATTGAGGTTACGGGTCCATATCATGATCAGGAGGACTACTGCCAGGACCAGGATGCAAGACTTTGTGCTGGCTGTGGTTTGATGTTACCGTGCAAAACCATGAAGAAGTTTAAGGATTCTAGCGCTCAACTCTATTGTAGACATTGCTTGAAGTTGCAAAAGTCAAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCAGATGGTGGGAATTGGGTATGTTGTGATGGTTGCAATGTTTGGGTGCATGCAGAATGTGATAATATCTCCGGGAAGCTTTTAAAGGATCTGGAACTTGTGGATTACTATTGCCCAGATTGTAAAACAAAAGTCAACTGTAAATCAGCAGAATCACGTCCATCCAATTCAAAAATCAATTCAATTAAAAAAAACGAAGAACATATGATACCTGAGGAGGTAACGGTGGTGTGCAATGGCATGGAAGGAACTTACATTTCAAGTCTTCATTTAGTTATGTGCAAGTGTGGTTCCTGTGTGCCAAGGAAGCAGACACTAAGTGAATGGGAGCGGCATACGGGTTGCAAAGCCAAAAAATGGAAATTCAGCGTGAAAGTAAAAAGCACAATGCTACCCCTAGAAAAATGGATTACTGAGAACAATTCTCAAGCTGGAGTTTCCCTACAGTTGGATCAGCAGCAGGTACTTGCCTTTTTGCAAGAGAAGTATGAGCCAGTTTATGCAAAATGGACTACAGAAAGGTGTGCCATTTGCAGATGGGTTGAGGACTGGGATGATAACAAGATTATTATATGTAACAGATGCCAAATTGCAGTCCACCAAGAATGCTATGGGGTGAAGAACGTTAAAGATTTTACTTCTTGGGTCTGTAGAGTATGTGAAACTCCTGACGTTGAGAGAGAGTGTTGCCTCTGTCCAGTAAAAGGTGGTGCTCTGAAGCCGACTGATGTTGACATGCTGTGGGTTCATGTGACGTGCGCTTGGTTCCGGCCTGAAGTTATTTTCCAAAATCACGAGATGATGGAACCTGCTATTGGAATCCTTAAAATTCCTCCATATGCGTTTTCAAAGGTTTGCGTTATTTGTAAACAAAGCCACGGATCGTGCTTAAGTTGTTGCAAATGTGCTACTTATTTTCATGTGATGTGTGCATCAAAAGCTGGATATAGCATGGAATTGCATTCCACGGAGAAGAATGGGAGTCAGAAAACAACAAAGCTAATATATTGTGCAGTTCATAGGGCCCCAAAACCAGATTCAGTACTGGTTGTGCACACACCCCTAGGGGTTTTCTCTCCCGGAACTGAACTTCAAAATCGTAAGGGATGCTTCAGGGGATCGAGGCTAGTCTCAACAAAGGACGTAGAACTTTCTGAAGAGTCCTCAAACTCTGAGATTAACAAGTTTGAGCCATCCTCTGCTGCCAGATGTCGTGTTTACAGAAGGCCTCTTAAGAAGAAAGTTGATATGCCAGTAATTCACTTACTGGGTGGACCAAGACATCATTCTTTAAGTGCAATAACTCAATTGAACAGTTATAAGGATGTTGAGCATTCTGAAGTATTTATTTCACTCAAGGAGCGCCTTTGTCATTTGCAGAAAACTGTAAAGCATCAAGTTTGCTTTGGAAAATCTGGTATACATGGATGGGGCCTCTTTGCTCATCGAGATATAGAAGAAGGAGAGATGGTTGCTGAATATTGTGGCGAACAGGTAAGACGGAGCATTGCTGATTTAAGGGAAGCTAAGTACCGGTCAGAAGGCAAAGACTGTTACCTGTTCAAGATCAGCGAGGAAGTGGTAATTGATGCAACAGACAAGGGCAACATAACACGCTTAATAAACCATTCTTGCATGCCGAACTGCTATGCGAGGATTATAAGTTTGGATGATGAGGAGAGCCGAATTGTACTTATCGCCAAGACCAATATATGTGCTGGTGAAGAACTAACGTATGACTACTTGTTCGATCCGGATGAGCTTGATGAACTGAAAGTTCCCTGTCATTGCAATGCCCCAAATTGTAGGAAGTTTATGAATTAG 3147 0.4303 MILKRNMKIEIPNLKRCRLEELDPEDSMCAANPKKRRASWFLSPGMPAEDEYLGRGSGFLCSKESHCGGDLRSNPDSTKSNAKTVLKPGSKVVRPPLLRSSRGRQQILPSRFRDSVLDSWKNKRIQGENTYSSFEEDKFLGEDESKLTGMEFARQGDNVDSNLKNSIYYSHTEMEKEKVLGALDSSDFDAADTEHMKSFSTVRTTVKESCSSLVESQNYASRLNSECVNPKTNGKAEKRVDIYKLEDFAWGDIVWAKCGKRYPAWPAVVIDPILQAPKSVLNCCVPGAICVMFFGYSKKGKQRDYAWVRQGMVFPFMEFMERFQRQTRLYRSKPSDFRMALEEALLAEDGILDSHLGAEITTKSNVEAHPSADIEVTGPYHDQEDYCQDQDARLCAGCGLMLPCKTMKKFKDSSAQLYCRHCLKLQKSKQYCGICKKIWHHSDGGNWVCCDGCNVWVHAECDNISGKLLKDLELVDYYCPDCKTKVNCKSAESRPSNSKINSIKKNEEHMIPEEVTVVCNGMEGTYISSLHLVMCKCGSCVPRKQTLSEWERHTGCKAKKWKFSVKVKSTMLPLEKWITENNSQAGVSLQLDQQQVLAFLQEKYEPVYAKWTTERCAICRWVEDWDDNKIIICNRCQIAVHQECYGVKNVKDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVDMLWVHVTCAWFRPEVIFQNHEMMEPAIGILKIPPYAFSKVCVICKQSHGSCLSCCKCATYFHVMCASKAGYSMELHSTEKNGSQKTTKLIYCAVHRAPKPDSVLVVHTPLGVFSPGTELQNRKGCFRGSRLVSTKDVELSEESSNSEINKFEPSSAARCRVYRRPLKKKVDMPVIHLLGGPRHHSLSAITQLNSYKDVEHSEVFISLKERLCHLQKTVKHQVCFGKSGIHGWGLFAHRDIEEGEMVAEYCGEQVRRSIADLREAKYRSEGKDCYLFKISEEVVIDATDKGNITRLINHSCMPNCYARIISLDDEESRIVLIAKTNICAGEELTYDYLFDPDELDELKVPCHCNAPNCRKFMN 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2108g00007 1048 Pfam PWWP domain 251 346 IPR000313 -
Pral2108g00007 1048 CDD SET_SETD1-like 895 1044 - -
Pral2108g00007 1048 ProSitePatterns Zinc finger PHD-type signature. 616 661 IPR019786 -
Pral2108g00007 1048 ProSiteProfiles SET domain profile. 906 1023 IPR001214 GO:0005515
Pral2108g00007 1048 ProSiteProfiles Zinc finger PHD-type profile. 613 664 IPR019787 -
Pral2108g00007 1048 ProSiteProfiles Extended PHD (ePHD) domain profile. 667 782 IPR034732 -
Pral2108g00007 1048 Pfam PHD-finger 431 484 IPR019787 -
Pral2108g00007 1048 SMART set_7 906 1029 IPR001214 GO:0005515
Pral2108g00007 1048 FunFam Histone-lysine N-methyltransferase 881 1048 - -
Pral2108g00007 1048 ProSiteProfiles Post-SET domain profile. 1032 1048 IPR003616 -
Pral2108g00007 1048 SMART PostSET_3 1032 1048 IPR003616 -
Pral2108g00007 1048 Gene3D SET domain 880 1048 IPR046341 -
Pral2108g00007 1048 CDD PHD_TCF19_like 432 482 - -
Pral2108g00007 1048 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 610 664 IPR013083 -
Pral2108g00007 1048 Gene3D - 241 349 - -
Pral2108g00007 1048 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 423 490 IPR013083 -
Pral2108g00007 1048 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1048 IPR025780 -
Pral2108g00007 1048 PANTHER PHD FINGER PROTEINS 80 463 - -
Pral2108g00007 1048 SMART PHD_3 615 662 IPR001965 -
Pral2108g00007 1048 SMART PHD_3 431 483 IPR001965 -
Pral2108g00007 1048 SMART PHD_3 726 782 IPR001965 -
Pral2108g00007 1048 SUPERFAMILY FYVE/PHD zinc finger 429 489 IPR011011 -
Pral2108g00007 1048 SUPERFAMILY Tudor/PWWP/MBT 246 350 - -
Pral2108g00007 1048 CDD PHD_ATX3_4_5_like 615 661 IPR042011 -
Pral2108g00007 1048 Pfam PHD-finger 628 662 - -
Pral2108g00007 1048 Pfam SET domain 917 1022 IPR001214 GO:0005515
Pral2108g00007 1048 ProSiteProfiles Zinc finger PHD-type profile. 429 485 IPR019787 -
Pral2108g00007 1048 SMART PWWP_4 248 317 IPR000313 -
Pral2108g00007 1048 MobiDBLite consensus disorder prediction 71 85 - -
Pral2108g00007 1048 CDD PWWP_AtATX3-like 251 350 - -
Pral2108g00007 1048 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 665 783 IPR013083 -
Pral2108g00007 1048 FunFam Histone-lysine N-methyltransferase 665 784 - -
Pral2108g00007 1048 SUPERFAMILY SET domain 899 1045 IPR046341 -
Pral2108g00007 1048 ProSiteProfiles PWWP domain profile. 250 319 IPR000313 -
Pral2108g00007 1048 Pfam PHD-zinc-finger like domain 669 781 - -
Pral2108g00007 1048 SUPERFAMILY FYVE/PHD zinc finger 614 678 IPR011011 -
Pral2108g00007 1048 MobiDBLite consensus disorder prediction 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2108g00007 Pral-Chr2108 56571 65192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2108g00007 616 769 C2H2 Transcription Factor Family AT3G14740 35.404 3.85e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pral2108g00007 zf-HC5HC2H_2 2.4e-28 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2108g00007 - - pcin:129287753 1841.24