Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2108g00003 ATGATGGATGCCAAGGGACAAAAAATTGTGAGGTTTAAGGACTGGAGTTCAGAATCATCTTCCAGTGCGGAGATAACAAATTCTGCTGATGCTGGATATCGTCAGAGAAAAGCTGGACCAAGAGTAAGAGCTGTGTTTAAGAATATTCGAAGAAGAATCCAGAGAAGGCTTGAGAAGATTAGAACCCTGAGAAAACCTATAAATTTGCATCCAATAAGTGATGCAGCGACCAAGAAATCAGTTTCGAAGAGGAAGATTCTTGATCCACAGGGGTCTTTCCTTCAGAAATGGAACAAAATATTTGTGATCACATGTGTACTGGCAGTATCAGTGGATCCTCTGTTCTTCTACAGCCCAGTTGTTGATAACGAAAGAAAATGCCTTGATATGAATAGACCATTGCAGATCACTGCCAGTGCCCTTCGTACATTCTTTGACCTTTTCTACATTCTCCACATAACATTTCAGTTTCAAACGGGCTTTATCGCCCCTTCTTCTCGAGTATTTGGTAGGGGTGAGCTCGTTGATGATCCTCAGGCTATTGCAAAAAGATACCTATCTTCATTCTTCATCATTGACATCCTGTCAATTATTCCAGTTCCACAGGCGGTTGTTTTAGCCATGAGACGTTCAGCTCCATCTCTAGAAAAGGACTGGTTAGAATATGCAATATTAATCCAATATGTCCCCAGATTTCTTCGGATCTATCCATTATTCACAGAAGTTACTAGAACTTCTGGCATACTGACTGAGACAGCATGGGCCGGCGCTGCTTATAATCTCTTTCTCTATATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTACCTGTTTTCAGTAGAATCAGAGCTTCGGTGCTGGCACAGAGAATTGAAGATTGCTAATTTGTCTACACACATGCGCTGTCGATACCGGAATCCAGATGTCATAGCACGTCTCAATAATTCTTGTCCCTTCAAGGATCCTGACAAAATTTACAACCCCAGAGTCTTCAATTTCGGAATATTTACCGACGCTTTACAATCTCGTGTGGTGGAGTCGACAACGGATTTTCCTCAAAAGATCTTCTTCTGCTTTTGGTGGGGTTTGCGCAATGTAAGTTCTCTGGGACAAAATCTCAAGACAAGTACATATGTCGGGGAGATCATCTTTGCTTGCTTCATCGCAATCTTTGGGTTGGTTTTGTTCTCATTGCTCATTGGAAACATGCAGAAATATCTACAATCTGTGACTGTTAGAGTTGAAGAAATGAGAATCAAGAGGCGGGACGCAGAGCGGTGGATGTCCCACCGTATGCTACCTGAGCACTTGAGGGAAAGAATCAGGCGGTATGAGCATTACAAATGGCAAGAAAACAGGGGAGTGGATGAGGAAACATTAATCCAAAATCTTCCTAAAGATCTCAGAAGAGACATAAAGCGTCATCTTTGCTTGGATTTACTTAAGAAAGTGCCAATGTTTGAGAAAATGGATGAGCAATTGTTGGATGCACTTTGTGACAGGCTGAAGCCAGTACTGTATACAGAAAAGAGCGCCATTATTCGCGAAGGAGATCCAGTGGATCAAATGCTATTCATTATGCGAGGAAACCTTGCAACTATGACGACAAACGGTGGAAGAACTGGTTTTTTCAATTCCTTCGTTATTAAGGCAGGTGACTTCTGTGGGGAGGAGCTTTTAACATGGGCCTTGGACCCCAACTCATCCTCAAATCTTCCCATTTCAACCAGAACAGTAGAATCTTTATCAGAAGTTGAAGCCTTCGCTCTCATGGCTGATGACTTGAAGCTCGTTGCTTCCCAATTTCGACGCCTTCACAACAAACACATCCAGCACACTTTCAGGTACTATTCCCTGCAATGGAGGACATGGGCGGCCTGTTTCATACAAGTAGCTTGGCGTCGCCACTGTAAAAGGAAGATTGAGAAATCTTTACGTGAAGCAGAAAACAGGCTACAAGATGCTTTGGCGAAAGAGGAAGGTTCTTCTGTAAGTTTCGGTGCCACCATATATGCATCAAGGTTTGCTGCCAATGCCTTACGCAGGCTGCGAAAGAAGGGGGAACGAAACAACAGAATGCCTCAGAGATTGCTTCCTCTGCTGCCTCAGAAGCCAACTGAGCCTGATTTCACCGCGCAATCTTTAGGATAA 2151 0.4333 MMDAKGQKIVRFKDWSSESSSSAEITNSADAGYRQRKAGPRVRAVFKNIRRRIQRRLEKIRTLRKPINLHPISDAATKKSVSKRKILDPQGSFLQKWNKIFVITCVLAVSVDPLFFYSPVVDNERKCLDMNRPLQITASALRTFFDLFYILHITFQFQTGFIAPSSRVFGRGELVDDPQAIAKRYLSSFFIIDILSIIPVPQAVVLAMRRSAPSLEKDWLEYAILIQYVPRFLRIYPLFTEVTRTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSVESELRCWHRELKIANLSTHMRCRYRNPDVIARLNNSCPFKDPDKIYNPRVFNFGIFTDALQSRVVESTTDFPQKIFFCFWWGLRNVSSLGQNLKTSTYVGEIIFACFIAIFGLVLFSLLIGNMQKYLQSVTVRVEEMRIKRRDAERWMSHRMLPEHLRERIRRYEHYKWQENRGVDEETLIQNLPKDLRRDIKRHLCLDLLKKVPMFEKMDEQLLDALCDRLKPVLYTEKSAIIREGDPVDQMLFIMRGNLATMTTNGGRTGFFNSFVIKAGDFCGEELLTWALDPNSSSNLPISTRTVESLSEVEAFALMADDLKLVASQFRRLHNKHIQHTFRYYSLQWRTWAACFIQVAWRRHCKRKIEKSLREAENRLQDALAKEEGSSVSFGATIYASRFAANALRRLRKKGERNNRMPQRLLPLLPQKPTEPDFTAQSLG 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2108g00003 716 MobiDBLite consensus disorder prediction 685 716 - -
Pral2108g00003 716 FunFam Cyclic nucleotide-gated ion channel 1 484 602 - -
Pral2108g00003 716 SUPERFAMILY Voltage-gated potassium channels 88 408 - -
Pral2108g00003 716 Gene3D - 99 412 - -
Pral2108g00003 716 FunFam Cyclic nucleotide-gated ion channel 1 413 477 - -
Pral2108g00003 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 75 710 - -
Pral2108g00003 716 Coils Coil 638 658 - -
Pral2108g00003 716 CDD CAP_ED 486 617 IPR000595 -
Pral2108g00003 716 Gene3D Jelly Rolls 484 604 IPR014710 -
Pral2108g00003 716 SUPERFAMILY cAMP-binding domain-like 415 611 IPR018490 -
Pral2108g00003 716 ProSiteProfiles cAMP/cGMP binding motif profile. 486 570 IPR000595 -
Pral2108g00003 716 SMART cnmp_10 486 617 IPR000595 -
Pral2108g00003 716 Pfam Ion transport protein 97 414 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral2108g00003 716 Gene3D Helix hairpin bin 413 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2108g00003 Pral-Chr2108 34267 40349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2108g00003 2 712 Ion Channels AT5G53130 64.592 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2108g00003 K05391 - qsa:O6P43_017768 1042.34