Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2105g00003 ATGGCCAACAAATGTACTGGTCCCGCCTTGAATGGTCATGCTACCTATAATCGAGACTCTGACAAGAACAAAGCTACTCCTGTTGAAGGAGAATTATCATCTTTTGAAGAGGACTCTAAGGACATTGACGCATTGTTGAGCTTGGAAGGTAAGGAACTAGAAGACCATGATGAGGAAGAGGTCAGCACTGCGAGGGCTAACGAAAATTATGAAAGTGTCTATGACACTTGCTCCAGTTATGGCTCAAAATCAAAGAAAAGGTCATCGTCATCTGTTCGAAAGTCTTCTAGGATCCATGGTCACTGCAGCAACCCCGAAATTAAGCACTGGGGAATGAGGAGAATGATTAGGGTACTGGGAGGGATCGTGCCTGGAGGCGGTGACCAAATGGATTCTGTCACCGTTTTAGCTGAAGCTGTGAGATATCTCAAGTCTCTCACGGTGGAGTCTTAG 453 0.457 MANKCTGPALNGHATYNRDSDKNKATPVEGELSSFEEDSKDIDALLSLEGKELEDHDEEEVSTARANENYESVYDTCSSYGSKSKKRSSSSVRKSSRIHGHCSNPEIKHWGMRRMIRVLGGIVPGGGDQMDSVTVLAEAVRYLKSLTVES 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2105g00003 150 MobiDBLite consensus disorder prediction 75 104 - -
Pral2105g00003 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 147 IPR036638 GO:0046983
Pral2105g00003 150 PANTHER TRANSCRIPTION FACTOR BHLH145 15 149 IPR037546 -
Pral2105g00003 150 MobiDBLite consensus disorder prediction 1 40 - -
Pral2105g00003 150 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2105g00003 Pral-Chr2105 74693 75145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2105g00003 33 150 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 38.686 3.02e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2105g00003 - - gmx:100791998 154.451