Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2105g00002 ATGGATGCAACCTTTGCTTTAACGCTCGTAGAAGCTATCTTGATTTTGCTGGCTATAGCAATTTCTAAAGCCGTCAGATTAATCTCTCCACCTCATGATAGTTGTAAAGATGTTGGTGATTCGGTTGCCACGGTTTCTTCTCTTTCTAATAACATTGTTGCTCCTTCTGCAACCAAGTACGACGTCTTTCTTAGCTTTAGAGGAGAAGATACTCGTGACACTTTCTCAAGTTATCTCTATCACGCACTTCGCGAAGCTAACATTGATACTTTTATGGATCACAAGCTCCACAAAGGAGATCATATCTCAGATATTCTCTTGAAAACAATAGAGAAATCAGAGATATCTTTGATTATTTTCTCTGAAGATTATGCTTATTCAACTTGGTGTATGGATGAGCTCGTTCACATTATGAAATGTAAAGATAAGTGTGGAAGGCTTGTTGTCCCAATTTTCTACAACGTAGATCCATCAGATATTAGGAAACAGAATGGGGGATTTGGATATGGATTTGCTAAGCTCAAGCAGAGATTTAAGCGCAATCAAGAAAGAGTGCAGGAGTGGGAAAATGCTTTGATCAAATCAGCAAGTCTATCTGGGTGGGATTCAAAACATATCAGGCCTGAAGCCAAACTTGTCAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATCGCAAGTCGTCCTTTCATGTGGAAGGACTAGTTGGGATTGATCATCAAATTCAGGAAGTTGAAGAGCTACTGAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGCAAAACCACTCTTGCTAGTGCCGTATTTGACAGGTTGAAAGCTGAGTTTGAAGCTTCCTGCTTTGTTGAAAATGTGAGACAACTGCTGGAAAAGAATGGTGGCTTGAATGAATTGCTGGAAAAATGCCTTAAAGAATTATTAAAAGATGAGGAGATTAACACTTACAATTTAAGATCTAATTTTGTGAGAAGAAGGCTTCACCGGAAAAAAATTCTTCTGGTACTTGATGATGTGGACAATTTTATAGCAGCTGAAGATTTAATCAAATCATATGGTTGGTTTGGGGATGGAAGTAGAATTATTATGACATCTAGAGACATGCAAGTGCTTAAGAATGCTTCTGCATTTCTAACATATCATGTTCCAACAATGGATCACCATCATGCTCTTCATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATAAGCCATTCAAAAACTACTTGGAGTTATCAGAGCGGGCAGTGTATTATTGTCATGGAAATCCTTTAGCGCTAAAAGTGCTGGGTTCCTTTCTTCATGAGAGAGAAAAAGAAGTATGGGAAAGTGCTCTGGCAAAACTAAATCATACTCTTCACAACGACATTTTTAAAGTGTTGAAGTTGAGTTTTGATGGACTTGATGACGATAAGAAGAATGCATTTCTTGACCTAGTATTTTTTCCGAACGAAGGACCGTGGATTTCTCTAGATTGTGCTAGAGCCTTACATGCAGATATTGACATAGAGGTACTTAAAGATAGATCCCTCATTCCATTGCATGCTCTGTTAGTGGAGATGGGCCTTGAAATTTCTCATCAACAATTAATATCTAACTCTGGAAAACCCATTCGACTTTGGAGACCTGAGGATGTTTATCATTTCTTCAACAATGACAAGGGGATTGAGGCAATTCGATGCATGTTATTAGATGCAAGCCAGATAGAAAGCATGACATTGAGGGCTACTCATTTTCGAAGGATGCGTCATTTAATGTTCCTTAATGTTTACAAGTCTGATCAGAGAAAGCCTTCAAAGTTGAATATTTTTGAAGAGTTGGATTATCTTTCGGAAGAATTAAGGTTTCTTAGTTGGCAACATTATCCACTGCCATCTGTGCCATTACAATCTTGTGCTAAGAATCTCATTGAACTTAAAAATGCCTCATAG 1938 0.3793 MDATFALTLVEAILILLAIAISKAVRLISPPHDSCKDVGDSVATVSSLSNNIVAPSATKYDVFLSFRGEDTRDTFSSYLYHALREANIDTFMDHKLHKGDHISDILLKTIEKSEISLIIFSEDYAYSTWCMDELVHIMKCKDKCGRLVVPIFYNVDPSDIRKQNGGFGYGFAKLKQRFKRNQERVQEWENALIKSASLSGWDSKHIRPEAKLVKKIVKDILSKLNRKSSFHVEGLVGIDHQIQEVEELLSEARIVGIWGMGGIGKTTLASAVFDRLKAEFEASCFVENVRQLLEKNGGLNELLEKCLKELLKDEEINTYNLRSNFVRRRLHRKKILLVLDDVDNFIAAEDLIKSYGWFGDGSRIIMTSRDMQVLKNASAFLTYHVPTMDHHHALHLFSLKAFKQNKPFKNYLELSERAVYYCHGNPLALKVLGSFLHEREKEVWESALAKLNHTLHNDIFKVLKLSFDGLDDDKKNAFLDLVFFPNEGPWISLDCARALHADIDIEVLKDRSLIPLHALLVEMGLEISHQQLISNSGKPIRLWRPEDVYHFFNNDKGIEAIRCMLLDASQIESMTLRATHFRRMRHLMFLNVYKSDQRKPSKLNIFEELDYLSEELRFLSWQHYPLPSVPLQSCAKNLIELKNAS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2105g00002 645 Gene3D - 228 380 IPR027417 -
Pral2105g00002 645 SMART till_3 59 198 IPR000157 GO:0007165
Pral2105g00002 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 481 IPR027417 -
Pral2105g00002 645 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 642 IPR044974 GO:0006952
Pral2105g00002 645 Pfam TIR domain 59 228 IPR000157 GO:0007165
Pral2105g00002 645 Coils Coil 171 191 - -
Pral2105g00002 645 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
Pral2105g00002 645 PRINTS Disease resistance protein signature 254 269 - -
Pral2105g00002 645 PRINTS Disease resistance protein signature 422 436 - -
Pral2105g00002 645 PRINTS Disease resistance protein signature 329 343 - -
Pral2105g00002 645 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 201 IPR035897 -
Pral2105g00002 645 Gene3D - 387 471 IPR042197 -
Pral2105g00002 645 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Pral2105g00002 645 SUPERFAMILY "Winged helix" DNA-binding domain 458 551 IPR036390 -
Pral2105g00002 645 Gene3D - 55 227 IPR035897 -
Pral2105g00002 645 Pfam NB-ARC domain 242 457 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2105g00002 Pral-Chr2105 16213 20744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2105g00002 56 641 WRKY Transcription Factor Family AT4G12020 27.393 9.46e-57 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2105g00002 - - pcin:129286024 788.875