Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2099g00010 ATGTCTGAAAGAGATTCCACTAAGATGCTAGCATTCTTCTTCTATGTCGCTTTCTTTGCATCTGCTGCTGCTAGAGATAGTGAAGCAGAAGCTCTGTTGAAGTGGAGAGATAGCTTTAACAAAGAAAGCACATACACCTTGTCATCTTGGAAGAATGATACTAATCCTTGCAAAGACTTGTGGAGGGGAATTTCTTGTGATGAGTCCATGTCTGTGATCAACATAAGTCTCTCAAACCATAGCCTTCAAGGTATGCTTTCCAATCTCAACTTCACTGCCTTTCCTAATCTCCTCTACTTCAATATAAGTTACAACCAATTTTATGGATCCATTCCCCACGAAATTGGTAATTTGTCCAGAAGTTTGATGTTGAGTGTGTCAGATAATCCATTAATTAGGGGTCCCATTCCTCCTGAAATCTGGAACCTAACCACTCTAAATAGTCTTGATCTTAGTGCATGTAGTCTCACAGTACCAATTCCCCAAGAAATTGGGAATTTGAGGAATTTGAGCCTCCTATATCTTGGAAGAAGTTCCTTTTCTAGTCTCATTCCTAAAGAGATTGGAATGCTAAGCAATCTTGTAGACCTTTGTTTGCAAAGCAACTCTCTATCAGGGAGAATCCCATCATCAATTGGAAATTTGACCAAGTTACAGATACTTTTTCTTTATGAGAACAATCTCGGGGGTCCTATTCCTACTGGATTATGGAGTCTCTATTCTCTCATTAGTATTCAATTACATGGCAATGGATTTTCTGGGCCAATCTCTCCCTCTATTGGAAACCTGACAAATCTCAGAGACTTAACCTTAGCTGATAATAGACTAGTACTTTCTGTTCTAATTCCTCAATCCATTGGTAACATGATCAATTTAAACCAACTCTTTCTACAAAATAATAGTCTTTCAGGACATATTCCTTCCACCATAGGAAACATGACAAAGCTCGATACTCATGGATTAATGAAGAACAATCTTAGTGGTCAACTTCCACAGGAAATGAATAACTTAAGTTGTTATAGTTTACAACTGGGTGGTAATCATTTCCATGGCCATTTGCCACAACAGATTTGTCAACATAAGAGATTATATAGGTTTGTTGCTAGAGGTAACCAGTTCACTGGTCCTATTCCAACTAGTTTGAAGAACTGTTTTAGTCTAAAAAGACTCATGTTTCAGACTAACCAATTAGTTGATAATATCACGGATGCTTTTGGAGTATATCCTCATTTGAACTACATTGATCTAAGTGGAAATCAATTGTATGGCCACCTTTCATCTAGGTGGGGAGAGTATCTAAATCTCACACAATTGGTTATTCACAATAACAAGTTTTCTAGCAGTATACCACCAGAACTAGGAGAGGTAACTAAGCTTGGTTTACTTAATCTGTCTTTAAATCTTTTGTTTGGACAAATTCCAAAACAACTTAGGAAGTTGACCATGTTGACAAAACTCTTTTTGACCCACAATAACTTCTTTGGTAGCGTCCCCTCAAATATAAGATCACTTAGTCGGCTTGAAACTTTGGAGCTGGCAGCAAATAATTTCAATGGCACAATCACAAGAGAGCTTGGAGAATTAAAAAGCTTAAAGTTCTCGAACTTGAGCAAAAACAAATTTGATGAAAGCATTCCCCTTGAGTTTGGTCAACTCCAACATCTTGAACAACTTGATCTTAGTGACAATTTGTTAACTGGAAAAATACTGGCAAGACTTGGAATATTACTTGCATTGCAAATATCTTCTTGGGACGGGGGCCAAGGAAGTGTTTATAGGGCTAAGTTGTGTACAGGTGATGTTGTTGCTATAAAGAAGCTTCATTCAATGCCAAGTGGGGAAATCTCCAACAAGAAAGCTTTCACAAGTAATATTCAAGCTTTGACAGAGATCAAACATTGTAACATTGTGAAATTGTATGGGTTTTTTTCCAATTCACAATTCTCCATTTTGGTTTATGAGTTCTTGGAAGGTGGTAGCTTGGACAACATACTAAAGAATCTGAAACAAGCCACTGAGTTTAAGTGGAATAAGAGGGTGAATGTTGTTAAAGGGGTGGCTAATGCTTTATTTCATATGCATCATGGCTGTTCAATTCCCATTGTTCATCACGACATATCAAGCAAGAATGTTCTTCTAAGTTTTGACTATGAAGAAGCTCGCGTCATTGCCTTTGGACAACAAAGTTTTTGA 2193 0.3744 MSERDSTKMLAFFFYVAFFASAAARDSEAEALLKWRDSFNKESTYTLSSWKNDTNPCKDLWRGISCDESMSVINISLSNHSLQGMLSNLNFTAFPNLLYFNISYNQFYGSIPHEIGNLSRSLMLSVSDNPLIRGPIPPEIWNLTTLNSLDLSACSLTVPIPQEIGNLRNLSLLYLGRSSFSSLIPKEIGMLSNLVDLCLQSNSLSGRIPSSIGNLTKLQILFLYENNLGGPIPTGLWSLYSLISIQLHGNGFSGPISPSIGNLTNLRDLTLADNRLVLSVLIPQSIGNMINLNQLFLQNNSLSGHIPSTIGNMTKLDTHGLMKNNLSGQLPQEMNNLSCYSLQLGGNHFHGHLPQQICQHKRLYRFVARGNQFTGPIPTSLKNCFSLKRLMFQTNQLVDNITDAFGVYPHLNYIDLSGNQLYGHLSSRWGEYLNLTQLVIHNNKFSSSIPPELGEVTKLGLLNLSLNLLFGQIPKQLRKLTMLTKLFLTHNNFFGSVPSNIRSLSRLETLELAANNFNGTITRELGELKSLKFSNLSKNKFDESIPLEFGQLQHLEQLDLSDNLLTGKILARLGILLALQISSWDGGQGSVYRAKLCTGDVVAIKKLHSMPSGEISNKKAFTSNIQALTEIKHCNIVKLYGFFSNSQFSILVYEFLEGGSLDNILKNLKQATEFKWNKRVNVVKGVANALFHMHHGCSIPIVHHDISSKNVLLSFDYEEARVIAFGQQSF 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2099g00010 730 Gene3D Ribonuclease Inhibitor 238 485 IPR032675 -
Pral2099g00010 730 Gene3D Ribonuclease Inhibitor 486 583 IPR032675 -
Pral2099g00010 730 Gene3D Transferase(Phosphotransferase) domain 1 584 729 - -
Pral2099g00010 730 SUPERFAMILY L domain-like 191 423 - -
Pral2099g00010 730 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 129 - -
Pral2099g00010 730 FunFam Leucine-rich repeat receptor protein kinase EMS1 186 281 - -
Pral2099g00010 730 FunFam Nuclear pore complex protein NUP107 25 185 - -
Pral2099g00010 730 SUPERFAMILY Protein kinase-like (PK-like) 586 726 IPR011009 -
Pral2099g00010 730 Gene3D Ribonuclease Inhibitor 26 130 IPR032675 -
Pral2099g00010 730 FunFam Leucine-rich repeat receptor-like protein kinase TDR 335 584 - -
Pral2099g00010 730 Pfam Protein kinase domain 586 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2099g00010 730 ProSitePatterns Tyrosine protein kinases specific active-site signature. 701 713 IPR008266 GO:0004672|GO:0006468
Pral2099g00010 730 SMART tyrkin_6 575 730 IPR020635 GO:0004713|GO:0006468
Pral2099g00010 730 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Pral2099g00010 730 ProSiteProfiles Protein kinase domain profile. 577 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2099g00010 730 SUPERFAMILY L domain-like 370 586 - -
Pral2099g00010 730 SUPERFAMILY L domain-like 61 256 - -
Pral2099g00010 730 Gene3D Ribonuclease Inhibitor 131 237 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2099g00010 Pral-Chr2099 454250 456878 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2099g00010 586 726 Receptor kinase-like Gene Family AT4G08850 51.389 5.60e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2099g00010 Pkinase 5.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2099g00010 - - pcin:129295243 650.203