Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2099g00007 ATGATCAATTTAGTCCAACTTTTTCTGCAAAATAACAGTCTTTCAGGACATATTCCTTCCACCATAGGAAACATGACAAAGCTCAATACTTTGGTATTGATGAAGAACAATCTTGGTGGTCAACTTCCACGAGAAATGAATAACTTAAGTTGGTATAATTTACAACTGGGTGGTAATCATTTCCATGGTCATTTGCCACAACAGATTTGTCAAGATAACAGATTATATAGGTTTGTTGCTAGAGGTAACCAGTTCACTGGTCCTATTCCAACTAGTTTGAAGAATTGTTCTAGTCTAGAAAGACTTATGCTTCAGAATAACCAATTAGTTGATAATATCACAGATGCCTTTGGAGTATGTTCTCGTTTGGACTACATTGATCTAAGTGGAAATCAATTGTATGGCCACCTTTCATCCAAGTGGGGAAAGTGTCAAAGTCTCACATGGTTGATTATTCATAATAACAAGCTTTCTGGGGATATGCCACCAGAACTAGGGGAGGCAGCTAAGCTTGGTTTACTTGACTTGTCTTCAAATCTTTTGTCTGGACAAATTCCAAAACAACTTGGGAAGTTGACCATGTTGACAAAACTCTCTCTGACCCACAATAACTTCTTTGGTAGCATCCCCTCAAATATAAGATCACTTAGTCAGCTTGAAACTTTGGAGCTAGCAGCAAATAATTTCAATGGCACAATCACAAGAGAGCTTGGGGAATTAAAAAGCTTAAAGTTCTTGAACTTAAGCAAAAACAAATTTGATGAAAGCATTCCCCTTGAGTTTGGTCAACTCCAACATCTTGAACAACTTGATCTTAGTGACAATTTGTTAACTGGAACAATACCAGCAAGACTTGGAATGTTACCTGCATTGCAGGTATTGAACCTCTCACATAATAATCTCAATGGCACCATTCCTTCCACTTTCAGTGGACCAATGTCAGCTTTGTCTATAGTTGATATATCATACAATGAATTAGAAGGCCTCATTCCAAACAACCCAGCCTTTCACAACATTGATGCGTTGAGGAATAATAAAGGGTTGTGTGGTGATGTCGCTGGTTTAGGTGCCTGTGGTGATCTTCAAACAAATGGACATGGCCATAAGAGTAAAAAGTTCCTAATAATATTCCTTCCATTGGCCATACTACTATTATTAATTGTTGGAGCATCTTTCATTTTGGCTCGAATAGCAACAAAAGCCAAAAGCAAAGATGGAGAAGGTTCACCAGAAGATGTTTATTTTGTATGGAGTCTTGATAGAGAAGTAACATATGAAGATATCATTGAAGCCACAAAGGAATTTGATGAAAGATATCTCATTGGGAAAGGGGGCCAAGGAAGTGTTTATAGGGTTGAGTTGCCTACAGGTGATGTTGTTGCTGTAAAGAAGCTTCATTCAATGCCAAGTGGGGACATCTCCAACAAGAAAGCTTTCACAAGTGAGATTCAAGCTTTGACAGAAATCAAGCATCGTAACATTGTGAAGTTGTATGGGTTTTTTTCCAATTCACAATTCTCCATTCTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGACAACATACTAAAGAATCCAAAACAAGCCACTAAGTTCGAGTGGAGTAAGAGGGTAAATGTTGTTAAAGGTGTGGCTAATGCTTTATTTCATATGCATCATGGTTGTTCAATTCCCATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTGACTATGAAGAAGCTCGTGTCATTGACTTTGGAACAGCAAAGTTTTTGAATCCTAACTCAAACAATATGACCACATTTGCTGGCACATTTGGCTACGCTGCACCAGAGATTGCTTTCATTATGCAAGCAAATGAGAAATGTGATGTTTATAGCTTCGGAGTATTGACCTTAGAAATCATTATGGGTACACATCCCGCGGAGCTTATTTCATCTTTGGCAGAGAATTCAACCAATAATGATTTGTTGTTAAGCGACGTGTTGGACCCACGACTTTCTCCACTCACAAAACCAATCCAAGATGATGTGATCTTAGTTGCAAAAATAGCTTTTTCTTGCTTGAAAGAGACTCCTAACTCTCGTCCAACCATGGAACAAGTATCTAGGGAGCTTGCAAGGACACTAAAATCCTATTCAGAGGATCAATTTCACACCATCACAATTGGACAACTAATGAGGGGTTGA 2181 0.3838 MINLVQLFLQNNSLSGHIPSTIGNMTKLNTLVLMKNNLGGQLPREMNNLSWYNLQLGGNHFHGHLPQQICQDNRLYRFVARGNQFTGPIPTSLKNCSSLERLMLQNNQLVDNITDAFGVCSRLDYIDLSGNQLYGHLSSKWGKCQSLTWLIIHNNKLSGDMPPELGEAAKLGLLDLSSNLLSGQIPKQLGKLTMLTKLSLTHNNFFGSIPSNIRSLSQLETLELAANNFNGTITRELGELKSLKFLNLSKNKFDESIPLEFGQLQHLEQLDLSDNLLTGTIPARLGMLPALQVLNLSHNNLNGTIPSTFSGPMSALSIVDISYNELEGLIPNNPAFHNIDALRNNKGLCGDVAGLGACGDLQTNGHGHKSKKFLIIFLPLAILLLLIVGASFILARIATKAKSKDGEGSPEDVYFVWSLDREVTYEDIIEATKEFDERYLIGKGGQGSVYRVELPTGDVVAVKKLHSMPSGDISNKKAFTSEIQALTEIKHRNIVKLYGFFSNSQFSILVYEFLEGGSLDNILKNPKQATKFEWSKRVNVVKGVANALFHMHHGCSIPIVHRDISSKNVLLSSDYEEARVIDFGTAKFLNPNSNNMTTFAGTFGYAAPEIAFIMQANEKCDVYSFGVLTLEIIMGTHPAELISSLAENSTNNDLLLSDVLDPRLSPLTKPIQDDVILVAKIAFSCLKETPNSRPTMEQVSRELARTLKSYSEDQFHTITIGQLMRG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2099g00007 726 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 49 362 - -
Pral2099g00007 726 Pfam Protein kinase domain 439 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2099g00007 726 PRINTS Leucine-rich repeat signature 288 301 - -
Pral2099g00007 726 PRINTS Leucine-rich repeat signature 267 280 - -
Pral2099g00007 726 Gene3D Transferase(Phosphotransferase) domain 1 514 721 - -
Pral2099g00007 726 PANTHER LEUCINE RICH REPEAT KINASE 2 2 705 - -
Pral2099g00007 726 SMART LRR_typ_2 192 216 IPR003591 -
Pral2099g00007 726 SMART LRR_typ_2 240 263 IPR003591 -
Pral2099g00007 726 SMART LRR_typ_2 288 311 IPR003591 -
Pral2099g00007 726 SMART LRR_typ_2 1 25 IPR003591 -
Pral2099g00007 726 SMART LRR_typ_2 264 287 IPR003591 -
Pral2099g00007 726 FunFam Leucine-rich repeat receptor protein kinase MSP1 398 513 - -
Pral2099g00007 726 Pfam Leucine rich repeat 261 301 IPR001611 GO:0005515
Pral2099g00007 726 SUPERFAMILY RNI-like 7 345 - -
Pral2099g00007 726 SUPERFAMILY Protein kinase-like (PK-like) 413 703 IPR011009 -
Pral2099g00007 726 FunFam MDIS1-interacting receptor like kinase 2 514 709 - -
Pral2099g00007 726 Gene3D Ribonuclease Inhibitor 1 358 IPR032675 -
Pral2099g00007 726 ProSitePatterns Tyrosine protein kinases specific active-site signature. 559 571 IPR008266 GO:0004672|GO:0006468
Pral2099g00007 726 ProSiteProfiles Protein kinase domain profile. 435 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2099g00007 726 Gene3D Phosphorylase Kinase; domain 1 396 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2099g00007 Pral-Chr2099 336460 338866 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2099g00007 1 612 Receptor kinase-like Gene Family AT4G08850 43.770 1.39e-160 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2099g00007 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2099g00007 - - pcin:129318235 845.884