Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2099g00003 ATGCCAAGCGTGGAAATCTCCAACCAAAAAGCTTTCACAAGTGAGATTCAAGCTTTGACAGAAATCAAACATCATAATATTGTGAAGCTATATGGGTTTTATTCCAATTCACAATTCTCCATGTTGGTTTATGAGTTCTTTGAAGGTGGAAGCTTGGACAACATACTAAAGAATGATGAACAAGCCATTGTGTTTGACTGGAAAAAGAGGGTGAATGTTGTCAAAGGTGTGGCCAATGCTTTATTCCATATGCATCATTGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAACAACATTCTTCTAGGTTCTGACTATGAAGAAGCTCGCATCAACGACTTTGGAACAGCAAAGTTTTTGAATCCTAACTCAAACAACATGACCACATTTGCTGGCACATTTGGGTATGCTGCACTTGAGATTGCTTTCATTATGAAAGTGAACGAGAAATGTGATGTTTATAGCTTTAGAGTATTGACCTTAGAAATCATTATGGGTACACATCCCGCGAAGCGTATTTCATCTTTGGCAGGGAATTCAATCAATAATGATTTGTTGTTAAGTGATGTGCTGGACTCACGACTTTCTCCACTCACAAAATCAATCTTAGATGATGTGATCTTAGTTGCCAAAATAGCTTTTTCATGCTTGAGTGATTCTCCTCAGTCTCGTCCAACCATGGAACAACTATCTACACAGCTTGCAAGGACACCAAAATCTCATTCAGAGGATCAATTTCACACCATCACAATTGGGCAACTAATGAGGGATTGA 780 0.3833 MPSVEISNQKAFTSEIQALTEIKHHNIVKLYGFYSNSQFSMLVYEFFEGGSLDNILKNDEQAIVFDWKKRVNVVKGVANALFHMHHCCSIPIVHRDISSNNILLGSDYEEARINDFGTAKFLNPNSNNMTTFAGTFGYAALEIAFIMKVNEKCDVYSFRVLTLEIIMGTHPAKRISSLAGNSINNDLLLSDVLDSRLSPLTKSILDDVILVAKIAFSCLSDSPQSRPTMEQLSTQLARTPKSHSEDQFHTITIGQLMRD 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2099g00003 259 Gene3D Transferase(Phosphotransferase) domain 1 51 255 - -
Pral2099g00003 259 FunFam MDIS1-interacting receptor like kinase 2 47 242 - -
Pral2099g00003 259 SUPERFAMILY Protein kinase-like (PK-like) 8 235 IPR011009 -
Pral2099g00003 259 PANTHER LEUCINE RICH REPEAT KINASE 2 6 240 - -
Pral2099g00003 259 PIRSF ILK 3 253 - -
Pral2099g00003 259 Pfam Protein kinase domain 8 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2099g00003 259 Gene3D Phosphorylase Kinase; domain 1 2 50 - -
Pral2099g00003 259 ProSitePatterns Tyrosine protein kinases specific active-site signature. 92 104 IPR008266 GO:0004672|GO:0006468
Pral2099g00003 259 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2099g00003 Pral-Chr2099 38065 40998 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2099g00003 7 145 Receptor kinase-like Gene Family AT4G08850 58.273 3.42e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2099g00003 Pkinase 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2099g00003 - - pcin:129317280 367.851