Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2096g00002 | ATGTTTTCATCACCTTCTAAATGCCTGAATGGCATCGCTTTTTCTTCCTCAATTTCTCAACATGATAGGCAGCATCAAAATTCTCCCTTCATTTCTAAGACATTGAGAAGAGACGATGTAATGCCCCCGCAAGGAACTTCCCTTACTCAGAGTGGGGAAGATGCGTCTTTCCCACCTTCACATTCTTGTTATCCGGAAATACACTCGGCAGCATTCGTTTCTCGACCCCCAGAAAGTGATGATATTTCATGGGGACCAGATCCCTTTCAGGATATTCTTAATCTATCTGTAAATGATTCCGTACAGAACGATCAGATGGAAAATAGTTCTTGTTTTATGTCTGATGACAACTCCAAAAAAACTGATTTTGGGGAGTGGGTAGATCAGTTAATGTCAGTCGATGAATCTCCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAATGTACCGGATTCGAAATCAGAGGGGACCCACTCCACCAAGCAGCAGGATGCACCATCTGGAGAAGTTAATGCTCCTCCTACTTCAGCAACGAATGCACTACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTAGTGAGAAGGCTACTCCTAAGGGTGTTTTGAACCTAATGAAAGTTGAGGGTCTTACTATATATCATGTGAAAAGCCATCTGCAGAAGTATAGAACAGCCAGATTCAAGCCCGAATCATCAGGAGGAGCCTCTGAGAAGAAGTCAACGTCAACCAAAGAAATGAAATCTTCAGACTCGACAGCCATGGGGATTACTGAGGCGTTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAAAGAGAAATGGAGGACGGCAAACACAAGACATTACCCTCCTCCTTAGACGGGCCCACGGTATTAAATTCCCCCGCGATTGAGGGTCAGAAACATCTGGAATCAGCAGTATCAATGCAACAACCGCGGGCGAAGAATGTTCTGGGGATGCCTGCACAAAGCAAGAGGTGGAAGGAACTAAAGTTACTAATGAAGAAGAGGCGGGGCATGACCAGTTGGGTGCACCGGCCTCCAAACGGGCGAAAAGCAGGTGACAGCAGAATTCTCTAA | 1206 | 0.4511 | MFSSPSKCLNGIAFSSSISQHDRQHQNSPFISKTLRRDDVMPPQGTSLTQSGEDASFPPSHSCYPEIHSAAFVSRPPESDDISWGPDPFQDILNLSVNDSVQNDQMENSSCFMSDDNSKKTDFGEWVDQLMSVDESPHPNWSQLLVDDNVPDSKSEGTHSTKQQDAPSGEVNAPPTSATNALQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARFKPESSGGASEKKSTSTKEMKSSDSTAMGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEKQREMEDGKHKTLPSSLDGPTVLNSPAIEGQKHLESAVSMQQPRAKNVLGMPAQSKRWKELKLLMKKRRGMTSWVHRPPNGRKAGDSRIL | 401 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2096g00002 | 401 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 182 | 242 | IPR017930 | - | |
Pral2096g00002 | 401 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 185 | 239 | IPR006447 | GO:0003677 | |
Pral2096g00002 | 401 | MobiDBLite | consensus disorder prediction | 16 | 59 | - | - | |
Pral2096g00002 | 401 | Gene3D | - | 184 | 243 | - | - | |
Pral2096g00002 | 401 | MobiDBLite | consensus disorder prediction | 137 | 187 | - | - | |
Pral2096g00002 | 401 | MobiDBLite | consensus disorder prediction | 239 | 266 | - | - | |
Pral2096g00002 | 401 | SUPERFAMILY | Homeodomain-like | 183 | 239 | IPR009057 | - | |
Pral2096g00002 | 401 | Coils | Coil | 272 | 292 | - | - | |
Pral2096g00002 | 401 | MobiDBLite | consensus disorder prediction | 16 | 33 | - | - | |
Pral2096g00002 | 401 | FunFam | Myb family transcription factor | 184 | 242 | - | - | |
Pral2096g00002 | 401 | Pfam | MYB-CC type transfactor, LHEQLE motif | 269 | 315 | IPR025756 | - | |
Pral2096g00002 | 401 | MobiDBLite | consensus disorder prediction | 43 | 57 | - | - | |
Pral2096g00002 | 401 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 176 | 345 | IPR044848 | GO:0003700 | |
Pral2096g00002 | 401 | MobiDBLite | consensus disorder prediction | 160 | 186 | - | - | |
Pral2096g00002 | 401 | Pfam | Myb-like DNA-binding domain | 187 | 238 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2096g00002 | Pral-Chr2096 | 10408 | 15387 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2096g00002 | 1 | 327 | G2-like Transcription Factor Family | AT3G04450 | 43.678 | 3.86e-72 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Pral2096g00002 | Myb_DNA-binding | 6.8e-09 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2096g00002 | - | - | pcin:129312811 | 562.762 |