Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2095g00002 ATGTCGACGGTATACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGCTGAACACAACCCATGGTCCGCTCGACATTGAGCTATGGCCCAAGGAAGCACCCAAGGCTGTCAGGAACTTCGTGCAGCTCTGCCTTGAAGGTTATTACGTTAACACCATCTTTCATCGTATCATCAAGGACTTCCTTATACAAGGTGGCGATCCCACTGGCAGCGGCACAGGGGGTGAGAGTATTTATGGGGGTGTCTTCTCTGATGAATTTCATTCACGTCTAAGATTTAAACATAGAGGATTGGTTGCGATGGCAAGTGCGGGGTCACCACACTCCAATGGGAGTCAGTTTTTCATAACTCTGGATCGTTGCGATTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGATACATTATACAATCTTTTGAGATTGGGCGAACTTGAAACTGATAAGAATGATCGCCCTCTGGATCCCCCGAAAATATTATCAGTTGAGGTATTATGGAACCCATTCGATGATATTGTTCCAAGAACAATTCAGCCTCAGATCCAAGCTAGTACTGATATGGAAAGTAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTACTTTCATTTGGAGAAGAAGCTGAAGAAGAGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAACCAATTCCTAATAATGAACTGGGCTCATCAGGTGGCAAGTCGATGAGAGATTTGCAGTTATCTGTAAGGGATGCATTGAGCTCAAAGAAAGAAGAGTCTCAGAAAAAATCAGAAGCCAACCTTGATGACATTGATGATGATGATGATGATGATGATGAGGCGGACTTTGATGCCAGAATGCGGAGTCAAATACTTAAAAAGCGCCAAGAGTTAGGGGATTTACCACCCAAGCCAAAGTTGCAAAATGGAAGCTCAAGTCCAAAGAACCCCAATTCATCAGCGATCAGGTTCAATGCTGTAAATGTTGATGATGATCAACCTAGGGTGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCTGAAGCAAGAGCTGAACGAATGGCAAATGCAGATGTAGATTTGCAGCTGTTCAATGAATCTGAGAAAAATAGACAGTTGCGGAAGCAGAAGAAACGCAGAGTTCAAGGACGTGAAGATGAGGTTCTAGCAAAACTAGAGAAATTTAAGACGGCTCTATCGGAAAAGACCACACCCTCAGCCTCAACCGATGGTCCAGTAGTTGTAAATGAAGAGGATGTGTCGGACTGGAAAGGAGGTGGCTTAAAATTTGCGCCTGAGTCTGGCAAGGATCGGATGTCACGCAACGATGACCCCAACGACTATGTTGTGGTTGACCCCCTTTTGGAGAAGGGTAAAGAGAAGTTCAATAGGATGCAAGCTAAACAAAAGAAGCGAGAGCGAGAGTGGGCTGGAAAATCCCTTACTTGA 1494 0.4384 MSTVYVLEPPTKGKVVLNTTHGPLDIELWPKEAPKAVRNFVQLCLEGYYVNTIFHRIIKDFLIQGGDPTGSGTGGESIYGGVFSDEFHSRLRFKHRGLVAMASAGSPHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTLYNLLRLGELETDKNDRPLDPPKILSVEVLWNPFDDIVPRTIQPQIQASTDMESKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKEPIPNNELGSSGGKSMRDLQLSVRDALSSKKEESQKKSEANLDDIDDDDDDDDEADFDARMRSQILKKRQELGDLPPKPKLQNGSSSPKNPNSSAIRFNAVNVDDDQPRVEKLSMKKKGIGSEARAERMANADVDLQLFNESEKNRQLRKQKKRRVQGREDEVLAKLEKFKTALSEKTTPSASTDGPVVVNEEDVSDWKGGGLKFAPESGKDRMSRNDDPNDYVVVDPLLEKGKEKFNRMQAKQKKREREWAGKSLT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2095g00002 497 MobiDBLite consensus disorder prediction 381 497 - -
Pral2095g00002 497 MobiDBLite consensus disorder prediction 468 497 - -
Pral2095g00002 497 Coils Coil 205 232 - -
Pral2095g00002 497 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Pral2095g00002 497 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Pral2095g00002 497 CDD cyclophilin_CeCYP16-like 8 179 - -
Pral2095g00002 497 MobiDBLite consensus disorder prediction 264 282 - -
Pral2095g00002 497 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Pral2095g00002 497 MobiDBLite consensus disorder prediction 233 348 - -
Pral2095g00002 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Pral2095g00002 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Pral2095g00002 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Pral2095g00002 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Pral2095g00002 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Pral2095g00002 497 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Pral2095g00002 497 Gene3D - 2 182 IPR029000 -
Pral2095g00002 497 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Pral2095g00002 497 MobiDBLite consensus disorder prediction 320 340 - -
Pral2095g00002 497 MobiDBLite consensus disorder prediction 394 413 - -
Pral2095g00002 497 MobiDBLite consensus disorder prediction 297 315 - -
Pral2095g00002 497 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2095g00002 Pral-Chr2095 9383 14019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2095g00002 9 172 U-box Gene Family AT5G67530 49.390 5.52e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2095g00002 K12737 - gmx:100793148 731.095