Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2094g00004 ATGGACGCCAAGCGCCGGAAGCCCTTGCAGACCAAGCTTGAGCGCCGAAACGCCATGAAGAACATAGATTACCAAGCTCCCACCACCTCATACGACGAAGTCGCTTCTCTTGACCTTTTACGCCAAACCAGCTACAGGTTAAAGGGCTTCGACGATGAGGTTGACCTTCTTTTTCGCGGTTTAGGACTTTCTGGACCCGAAGACTTTGAAATCCCAACTGCAGAATGGAGAGCCCGAGAGGCTCGCTCTATCCATAGTGATAGTAACCCACTGATTGAAAAAGCACGAGATGAAATTCAAATTCCTGCTGAATTTCAACGCCGGGTTGAAATTAATAGTGATATAGAGCTAAAAGGTAAGAAATTGCAAGCTGGGATGGAGAGGAAGATTACTGTTGCTTATTCTAATTCGAATGCTTTGGGGTCCAATCAGGATGGTGGTAGAGTAATCAAAAGTGTTAGGCCTTCTGTTCTATTGCCTCCGCCGCCGGGGATGGTGCGGCGGCCAATCGCTAACAGGGTTACTGATTTTCCAATTCAAGTTAGACGCATTAGGTCTACTGGCGAAGATGAAGTGAGGGTCCCTAAAGGAAATGAGGAGGCTGTTGACGGAGATGAAGATGGTGGTGGTGGTGATAAGGGTACTGGTGTGGTTGATGAGTCAGTTCTTAACGTCTCACCATATGGGTCATTTAGATGCGCTTTCTCCTGTTGGCAAAAGGGAGAGATTCTGGGAAAGGGGTCATTTGGTACGGTTTATGAAGGCTTTACGAGTGATGGGTTCTTCTTTGCTGTGAAGGAGGTTTCTTTGCTGGATGAAGGAAGTCAGGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTCTTGAGTCGGTTTGAACATGAGAACATAGTTCGATATCTTGGCTCAGATAAGGATGAAAGTAAGCTATATATCTTCCTTGAGCTTTTAACAAAAGGGTCCTTGGCAAATCTCTATCGAAAGTATCATTTAAGGGATTCTCAAGTTTCTGCATACACACGGCAGATTTTAAGTGGCTTGAAGTATCTTCATGATTGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAGCGGATCAGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACTAAGTTTAATGACCTTAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTAAATTTAAAGAGCCGCGGCTATGGTCCGGCAGCCGATATATGGAGCCTAGGATGTACAGTTTTGGAGATGTTGACTCGACAGTCTCCTTACTCTGAATTGGAAGGGATGCAAGCATTATTTCGGATTGGCAGGGGCGAACCTCCACCAATTCCTGAATCAATATCGAAAGATGCTCGAGATTTTATTCAAAGATGCATACAAGTTAACCCTGAAAAACGGCCAACCGCAGCTATATTGTTGGAACATAAATTTGTAAAAAGAAAATTCTTGCCTCCAATAATTCCTGCTCCTCCACTTGTTAATGATTTTCGGTCTTGA 1536 0.4447 MDAKRRKPLQTKLERRNAMKNIDYQAPTTSYDEVASLDLLRQTSYRLKGFDDEVDLLFRGLGLSGPEDFEIPTAEWRAREARSIHSDSNPLIEKARDEIQIPAEFQRRVEINSDIELKGKKLQAGMERKITVAYSNSNALGSNQDGGRVIKSVRPSVLLPPPPGMVRRPIANRVTDFPIQVRRIRSTGEDEVRVPKGNEEAVDGDEDGGGGDKGTGVVDESVLNVSPYGSFRCAFSCWQKGEILGKGSFGTVYEGFTSDGFFFAVKEVSLLDEGSQGKQSIFQLQQEISLLSRFEHENIVRYLGSDKDESKLYIFLELLTKGSLANLYRKYHLRDSQVSAYTRQILSGLKYLHDCNVVHRDIKCANILVDASGSVKLADFGLAKATKFNDLRSSKGSPYWMAPEVVNLKSRGYGPAADIWSLGCTVLEMLTRQSPYSELEGMQALFRIGRGEPPPIPESISKDARDFIQRCIQVNPEKRPTAAILLEHKFVKRKFLPPIIPAPPLVNDFRS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2094g00004 511 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 163 494 - -
Pral2094g00004 511 ProSitePatterns Protein kinases ATP-binding region signature. 244 266 IPR017441 GO:0005524
Pral2094g00004 511 MobiDBLite consensus disorder prediction 188 214 - -
Pral2094g00004 511 Pfam Protein kinase domain 239 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2094g00004 511 ProSiteProfiles Protein kinase domain profile. 238 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2094g00004 511 Gene3D Transferase(Phosphotransferase) domain 1 236 499 - -
Pral2094g00004 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Pral2094g00004 511 MobiDBLite consensus disorder prediction 188 213 - -
Pral2094g00004 511 SUPERFAMILY Protein kinase-like (PK-like) 222 505 IPR011009 -
Pral2094g00004 511 SMART serkin_6 238 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2094g00004 511 FunFam Mitogen-activated protein kinase 1, putative, expressed 236 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2094g00004 Pral-Chr2094 19985 25240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2094g00004 12 493 MAP Kinase Kinase Kinase AT4G08500 45.230 2.86e-136 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral2094g00004 Pkinase 4.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2094g00004 K13414 - qsa:O6P43_012258 519.235