Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2088g00002 ATGCATCATGATTGCAAGCCAGTCATTGTTCACAGAGACATATCAAGCAATAACGTTTTATTGTCTTCAAATCTCGAAGTCCATCTCTCAGACTTTGGCACGGCAAGGTTCTTAAAAACCGATTCATCAATTTGGACGACTTTTACTGGCACATACGGTTATGCTGCTGCAGAGCTTGCATACACAATGGCAGTGACTGAGAAAGTTGATGTATATAGCTTTGTTGTTTTGGCCATTGAGTTGCTTATGGGAGAGCATCCTGGTGATTTTATATCACATACAAATCCATGGGATTGGTCATATCAGCTTGGCACATATTTTGGACCCTCGCTTGTCATCAATGAAGCATCAAAACTTTAA 360 0.4028 MHHDCKPVIVHRDISSNNVLLSSNLEVHLSDFGTARFLKTDSSIWTTFTGTYGYAAAELAYTMAVTEKVDVYSFVVLAIELLMGEHPGDFISHTNPWDWSYQLGTYFGPSLVINEASKL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2088g00002 119 PANTHER LEUCINE RICH REPEAT KINASE 2 1 98 - -
Pral2088g00002 119 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Pral2088g00002 119 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Pral2088g00002 119 SUPERFAMILY Protein kinase-like (PK-like) 1 102 IPR011009 -
Pral2088g00002 119 Pfam Protein kinase domain 6 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2088g00002 119 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2088g00002 Pral-Chr2088 14895 15351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2088g00002 1 103 Receptor kinase-like Gene Family AT5G65700 48.113 5.56e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2088g00002 Pkinase 2.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2088g00002 - - pcin:129313931 148.673