Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2087g00002 ATGTCCAAGGATCAGAACATAGCTGCTTTGCAAGAAAATGGAGGGGTTAAAGGCTTATCAGATTTACTAAAATCAGATCTTGAGAAAGGAATTAATGGAAGTGACGATGATATATTAAAGAGGAGAGTGACATTTGGAACGAATACATACCCTAAGAAAAAAGGGCGGAGTTTCTGGATGTTTCTCTGGGATGCTTGGCAAGACCTGACCCTCATCATATTGATTATAGCAGCTGTGGTGTCATTGGCACTTGGAATAAAAACAGAGGGCTTGCAAGAAGGATGGTATGATGGAGGAAGCATTGCCTTTGCTGTTTTTCTTGTCATAATAGTAACAGCTACCAGTGATTATCGCCAATCTCTGCAGTTCCAGAATTTGAATTCAGAAAAACAAAACATACAATTGGAGGTCATTAGAGGCGGTAGAGCAACAAAGATATCAATATTTGATGTTGTTGTTGGTGACGTTGTACCTCTCAAAATAGGAGACCAGGTTCCTGCTGATGGGGTTATAATCACTGCTCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAAGACCACAAATCACCTTTTTTGATGTCTGGCTGCAAAGTAGCAGATGGCGTTGGTGTTATGCTGGTAACTGGGGTCGGCATCAATACGGAGTGGGGGTTGTTGATGGCAAGCATCTCTGAAGATACTGGAGAAGAGACTCCATTGCAGGTACGTTTAAATGGAGTTGCAACTTTTATCGGCATTATAGGTCTAACAGTAGCTGGTGTTGTGCTAGTGGTCCTATTGGGCAGATACTTTTCTGGCAACACAAAAGATCTAAATGGAAATGTCGAATTTGTTGCTGGCCAGACGAGTATCAGTAGTGCACTAGATGACGTAGTAAAAATTTTTACTATTGCAGTCACAATTGTGGTTGTCGCAGTTCCTGAAGGTCTTCCTCTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTGCGAAGGCTTTCAGCCTGTGAAACTATGGGCTGTGCAACGACAATTTGCAGTGATAAAACAGGAACGTTAACCTTGAACCAGATGGCCGTGGTTGAGGCATGCATTGGGAGGAAGAAACTGAATTCACCTGATGACTCATCAAAGCTGAATTCAGAAGTTTTATCTCTGATAAAAGAGGGCATTGCACAGAATACAACTGGAACTGTTTTTGTGCCTAAGGATGGTGGAGAGACTGAGATATCAGGGTCTCCTACAGAAAAGGCAATCCTTTCTTGGGCAGTCAAGTTGGGAATGGATTTTGATCTTATCAGGTCACATTCAATAGTTCTCCATGTATTTCCCTTCAATTCAGAGAAAAAGCGAGGTGGTGTCTTGCTGAAGCAGAATGTGGATTCCACAGTACATATACATTGGAAAGGCGCTGCAGAGATAGTACTGGGAAAATGCTCTCAATATCTTGATTCAAACGGTTCCTTGCTTTCTATTGAAGAAGAGAAGGACTTTTTCAAGGCAGCTATTGAAGACATGGCTGCTCGCAGTTTGCGGTGTGTTGCCATTGCATACCGTTCATATGAATTGGACAGAGTTCCCTCTAATGAGGAGGATTTGGCCCAGTGGTCCTTACCTGAGGATGAACTTGTTTTGCTTGCTATAGTTGGTATAAAGGACCCATGTCGCCCTGGTGTCAAAGATGCAGTGACAACATGCACTGCCGCTGGTGTTAAGGTGCGCATGGTTACGGGAGACAATCTTCAAACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCGCATATAGATGCTGTTGAACCAGTTATCATTGAAGGAAAGACATTCCGGGCCTTATCTGAAAATGAAAGGGAACAAGTCGCTAAACAAATAACAGTGATGGGGAGGTCTTCTCCAAATGACAAGCTTTTACTTGTTCAAGCACTGCGTAAAGGGGGTGAAGTTGTTGCTGTTACTGGAGATGGTACCAATGATGCTCCCGCTCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTTCTGGAACTGAAGTCGCAAAAGAAAGTTCAGATATTATAATCCTGGACGATAACTTTGCGTCAGTTGTAAAGGTCGTCCGCTGGGGCCGTTCTGTATCTGCAAATATTCAGAAATTTATACAGTTCCAGCTCACAGTTAATGTAGCAGCTCTTGCCATAAATGTTGTGGCGGCAGTTTCTTCGGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGCTTAACCTTATCATGGACACACTTGGGGCCCTGGCACTAGCTACGGAACCGCCTACTGACCACCTTATGCACAGACCGCCGGTTGGTCGAAGGGAACCTCTCATAACGAATAACATGTGGAGGAACTTGCTTGTACAGGCTGTATATCAAATTGCGGTTCTCCTTGTTCTTAATTTTGGTGGAGAAAGTATTCTCAGGGGTAACTCTGCGGTCGAAACAATGCAACTGAAGAATACTTTGATTTTCAATGCATTTGTCCTCTGCCAAATTTTCAATGAGTTCAATGCTCGTAAACCAGATCAAATGAACGTATTCACCGGAGTGACCAAGAACCGTCTCTTTGTGGGTATTGTGGGATTGACCTTAATACTTCAGGTAATCATTATCGAGTTCCTTGGAAAGTTCACTGGCACAGTGAGGCTTGATTGGAAGTTGTGGCTCGTTTCTTTTATCATTGGCCTCGTCAGTTGGCCTCTTGCAGTGCTTGGAAAGTTCATCCCAGTTCCAAAAACACCTTTGTCTCGCACCTTTAAGAGGATGCTTATGCGATTTAAGAGGTCAAGAGCTCCTGCTACTCAATAG 2856 0.4349 MSKDQNIAALQENGGVKGLSDLLKSDLEKGINGSDDDILKRRVTFGTNTYPKKKGRSFWMFLWDAWQDLTLIILIIAAVVSLALGIKTEGLQEGWYDGGSIAFAVFLVIIVTATSDYRQSLQFQNLNSEKQNIQLEVIRGGRATKISIFDVVVGDVVPLKIGDQVPADGVIITAHSLAIDESSMTGESKIIHKDHKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIIGLTVAGVVLVVLLGRYFSGNTKDLNGNVEFVAGQTSISSALDDVVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGCATTICSDKTGTLTLNQMAVVEACIGRKKLNSPDDSSKLNSEVLSLIKEGIAQNTTGTVFVPKDGGETEISGSPTEKAILSWAVKLGMDFDLIRSHSIVLHVFPFNSEKKRGGVLLKQNVDSTVHIHWKGAAEIVLGKCSQYLDSNGSLLSIEEEKDFFKAAIEDMAARSLRCVAIAYRSYELDRVPSNEEDLAQWSLPEDELVLLAIVGIKDPCRPGVKDAVTTCTAAGVKVRMVTGDNLQTAKAIALECGILASHIDAVEPVIIEGKTFRALSENEREQVAKQITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVSANIQKFIQFQLTVNVAALAINVVAAVSSGDVPLNAVQLLWLNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNNMWRNLLVQAVYQIAVLLVLNFGGESILRGNSAVETMQLKNTLIFNAFVLCQIFNEFNARKPDQMNVFTGVTKNRLFVGIVGLTLILQVIIIEFLGKFTGTVRLDWKLWLVSFIIGLVSWPLAVLGKFIPVPKTPLSRTFKRMLMRFKRSRAPATQ 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2087g00002 951 CDD P-type_ATPase_Ca_PMCA-like 38 797 - -
Pral2087g00002 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 358 364 IPR018303 -
Pral2087g00002 951 SUPERFAMILY HAD-like 354 769 IPR036412 -
Pral2087g00002 951 FunFam Calcium-transporting ATPase 557 709 - -
Pral2087g00002 951 FunFam Calcium-transporting ATPase 681 928 - -
Pral2087g00002 951 Pfam Cation transporting ATPase, C-terminus 749 923 IPR006068 -
Pral2087g00002 951 SMART Cation_ATPase_N_a_2 15 86 IPR004014 -
Pral2087g00002 951 Gene3D - 366 564 IPR023299 GO:0000166
Pral2087g00002 951 FunFam Calcium-transporting ATPase 113 232 - -
Pral2087g00002 951 Gene3D - 35 232 - -
Pral2087g00002 951 FunFam Calcium-transporting ATPase 64 121 - -
Pral2087g00002 951 Pfam haloacid dehalogenase-like hydrolase 353 678 - -
Pral2087g00002 951 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Pral2087g00002 951 PRINTS P-type cation-transporting ATPase superfamily signature 557 568 - -
Pral2087g00002 951 PRINTS P-type cation-transporting ATPase superfamily signature 664 683 - -
Pral2087g00002 951 PRINTS P-type cation-transporting ATPase superfamily signature 688 700 - -
Pral2087g00002 951 PRINTS P-type cation-transporting ATPase superfamily signature 579 589 - -
Pral2087g00002 951 PRINTS P-type cation-transporting ATPase superfamily signature 356 370 - -
Pral2087g00002 951 PANTHER CATION TRANSPORTING ATPASE 9 926 - -
Pral2087g00002 951 Gene3D - 353 709 IPR023214 -
Pral2087g00002 951 Pfam E1-E2 ATPase 133 334 - -
Pral2087g00002 951 Pfam Cation transporter/ATPase, N-terminus 13 81 IPR004014 -
Pral2087g00002 951 SFLD p-type atpase 338 716 IPR044492 -
Pral2087g00002 951 Gene3D - 64 917 - -
Pral2087g00002 951 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 363 561 IPR023299 GO:0000166
Pral2087g00002 951 NCBIfam calcium-translocating P-type ATPase, PMCA-type 7 926 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral2087g00002 951 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 926 IPR023298 -
Pral2087g00002 951 NCBIfam HAD-IC family P-type ATPase 630 744 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral2087g00002 951 NCBIfam HAD-IC family P-type ATPase 291 387 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral2087g00002 951 SUPERFAMILY Calcium ATPase, transduction domain A 134 229 IPR008250 -
Pral2087g00002 951 PRINTS Sodium/potassium-transporting ATPase signature 476 494 - -
Pral2087g00002 951 PRINTS Sodium/potassium-transporting ATPase signature 349 370 - -
Pral2087g00002 951 PRINTS Sodium/potassium-transporting ATPase signature 99 119 - -
Pral2087g00002 951 FunFam Calcium-transporting ATPase 366 564 - -
Pral2087g00002 951 SFLD Haloacid Dehalogenase 338 716 - -
Pral2087g00002 951 FunFam Calcium-transporting ATPase 9 plasma membrane-type 210 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2087g00002 Pral-Chr2087 15167 27322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2087g00002 1 946 Primary Pumps ATPases AT3G21180 77.743 0.0 1480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2087g00002 K01537 - gmx:100777845 1532.31