Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2086g00003 ATGGGGTCTGTAGAGAAGGTAGACCTTGATTTTGATGAGGAGGTCCCTTTTAGCTCCTCAACAAACCCGGGGAAAGTCCATGCTTTTCAATCTGAGACAACTAATAATATGCTTTCTTCCGTAAATTTGGCCAGCTCATCCATCTTCAAGCAAGTGGGGATAAAACCCATCAGGAGCATATACATTGTCTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTAGCCATATTGCTACATTATCTAACAGGAAAACATGGATGGGTGTTCTTCTTCGCCTTACTGGGTATTACTCCTCTGGCGGAACGTCTGGGTTATGCTACTGAGCAGCTTGCATTTTTCACAGGACCAACAGTTGGGGGTTTGCTAAATGCCACATTTGGAAATGCAACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGGGTTGTTCAGCAATCTTTACTGGGTTCAATCTTGTCAAATATGCTTCTTGTTCTGGGATGTGCATTCTTTACCGGTGGGATTGTCCACTACGAAAAGGTTCAGGTTTTTGACAAGGCACCTGCTGTTGTGAATTCGGGATTGCTATTGATGGCTGTAATGGGAATACTGTTCCCTGCCGTCCTTCACTTTACTCACTCAGAGGTTCACTTTGGCAAGTCAGAGCTTGCTCTATCCAGATTTAGTAGCTGTATAATGCTAATAGCATATGCTAGCTACCTTTTCTTTCAACTAAGAAGTCATCACAATAATTATAGTTCACTTGAAGAGGAAGGAGATGGTAATGAAAATCCTGATGAGGAAGAAGAATGTGAATTAACAAAATGGGAGGCGATAGGCTGGCTTGCTATTTTGACAGCATGGGTTTCTATTTTGTCTGGATATCTTGTTGATGCCATAGAGGGGGCATCTGAGTCATGGAATATACCAGTGGCATTTATAAGTGTCATATTGCTTCCAATTGTAGGAAATGCTGCAGAGCACGCAAGTGCTATCATGTTTGCCATGAAGGACAAGCTTGATATTACACTTGGAGTTGCTATTGGATCATCTACTCAGATATCTATGTTTGTGATCCCCTTTTGTGTGGTAGTTGGGTGGTGCATGGGAAAACCAATGGACTTGAATTTCCAACTCTTTGAGACTGCTACACTTTTCATCACCGTGCTTGTTGTCGCATTTATGTCGCAGGATGGGACCTCTAATTATTTTAAAGGCTTGATGCTTATTCTATGCTATCTCATTGTTGCGGCCAGTTTCTTCGTACACATGGACCCCAAAAACTCCAAAAACACATTCGCTGACATTGTGCTTGCGGAATCTGCCAACAGGTGA 1338 0.417 MGSVEKVDLDFDEEVPFSSSTNPGKVHAFQSETTNNMLSSVNLASSSIFKQVGIKPIRSIYIVLIKAKINMLLPFGPLAILLHYLTGKHGWVFFFALLGITPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYEKVQVFDKAPAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELALSRFSSCIMLIAYASYLFFQLRSHHNNYSSLEEEGDGNENPDEEEECELTKWEAIGWLAILTAWVSILSGYLVDAIEGASESWNIPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKPMDLNFQLFETATLFITVLVVAFMSQDGTSNYFKGLMLILCYLIVAASFFVHMDPKNSKNTFADIVLAESANR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2086g00003 445 FunFam Vacuolar cation/proton exchanger 267 423 - -
Pral2086g00003 445 Gene3D - 120 258 IPR044880 -
Pral2086g00003 445 Gene3D - 269 423 IPR044880 -
Pral2086g00003 445 FunFam Vacuolar cation/proton exchanger 120 259 - -
Pral2086g00003 445 NCBIfam calcium/proton exchanger 72 422 IPR004798 GO:0006816|GO:0015369
Pral2086g00003 445 Pfam Sodium/calcium exchanger protein 280 419 IPR004837 GO:0016020|GO:0055085
Pral2086g00003 445 Pfam Sodium/calcium exchanger protein 91 246 IPR004837 GO:0016020|GO:0055085
Pral2086g00003 445 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 48 427 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pral2086g00003 445 NCBIfam calcium/proton exchanger 63 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2086g00003 Pral-Chr2086 20324 26406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2086g00003 57 429 Antiporters AT3G13320 78.342 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2086g00003 K07300 - fve:101299212 681.019