Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2085g00006 ATGGCTGCTCGAAGGCTTTCCTCTTTGCTTTCTCGCTCTCTAGCTACTTGTCTGCTTCAGTCACCAGGAAGAACCTGTGGTAGGTGGAGTAAGTTCAACAGATTTAGCACTGCAGCAGCAGCTGAGGAATTAATCACTCCCCAAGTTCCGATAAATTACACACAGCATCTAATAAATGGCCAATTTGTCGATGCTGCTTCAGGGAAAACTTTTCCAGCATATGATCCTCGCACAGGAGAAGTGATTGCTCATGTTGCTGAAGGCGATGCTGAAGACATCAACCGTGCAGTGTCAGCAGCTCGCAAGGCCTTCGATGAAGGACCTTGGCCAAAAATGACCGCTTATGAGAGATGTCGGATATTGCTGCGATTTGCTGATTTGGTTGAGAAGCACAGCAATGAGCTTGCCGCTCTAGAGACATGGAACAATGGGAAGACTTTTGAACAATCATTCAAGTCTGAACTACCAATGTTCGTGCGTCTGTTTCATTACTATGCTGGTTGGGCAGATAAAATCCATGGTCTGACAGTTCCATCAGATGGAAACTATCACATGCAGGTGTTGCATGAGCCAATTGGTGTTGCTGGACAAATTATACCTTGGAACTTTCCTCTTATTATGTTTGCTTGGAAAGTTGGCCCAGCTTTAGCTTGTGGTAATACCATCGTTCTCAAAACTGCAGAGCAAACTCCCCTAACTGCTCTCTATGTGGCAAAACTACTGCACGAGGCTGGTCTTCCCCGTGGTGTTTTGAATGTGGTTTCTGGGTTCGGTCCAACTGCTGGTGCAGCTCTTGCAAGTCATATGGATGTGGACAAGCTAGCATTCACTGGATCATCCGACACTGGAAAAGTTGTGCTAGGATTGGCTGCAAAGAGCAACCTTAAGCCAGTGACATTGGAGCTCGGAGGGAAATCACCTTTCATAGTATTTGATGATGCCGATGTTGACAAGGCTGTAGAACTTGCCCACTTCGCTCTGTTTTTCAATCAGGGACAATGTTGCTGTGCTGGGTCTCGCACCTTCGTACACGAGCGAATCTATGACGAGTTCTTAGAGAAATCAAAGGCACGTGCCATGAGACGCATTGTTGGCGATCCCTTCAAGAAAGGTGTTGAACAAGGCCCCCAGATCGACGGCGAACAATTTCAGAAAATCCTTAACTACATAAGATCTGGAATTGAAAGCAACGCCACCCTTGAATGTGGAGGAGGCAGAATCGGTTCAAAGGGCTTCTTCATCGAGCCAACTGTCTTCTCCAATGTTCAGGATGATATGTTGATAGCAAAGGAGGAAATCTTCGGACCAGTTCAAGCGATATTGAAATTCAAGGACATTGAGGAGGTAATAAGGAGGTCAAATGATACGAGGTATGGTCTAGCCGCCGGAGTGTTCACTAAGAGCGGGGACACAGCCAACCAAATGATGAGGGCACTGAGAGTGGGAACTGTGTGGATTAATTGCTTCGATGTGTTCGATGCTGCAATCCCTTTTGGTGGCTACAAGATGAGTGGGACGGGTAGAGAGAAAGGAATTTACAGTCTTAACAATTACTTGCAGGTTAAAGCTGTGGTCTCGCCATTGAAGAATCCTGCTTGGCTCTAA 1605 0.4642 MAARRLSSLLSRSLATCLLQSPGRTCGRWSKFNRFSTAAAAEELITPQVPINYTQHLINGQFVDAASGKTFPAYDPRTGEVIAHVAEGDAEDINRAVSAARKAFDEGPWPKMTAYERCRILLRFADLVEKHSNELAALETWNNGKTFEQSFKSELPMFVRLFHYYAGWADKIHGLTVPSDGNYHMQVLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLLHEAGLPRGVLNVVSGFGPTAGAALASHMDVDKLAFTGSSDTGKVVLGLAAKSNLKPVTLELGGKSPFIVFDDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKARAMRRIVGDPFKKGVEQGPQIDGEQFQKILNYIRSGIESNATLECGGGRIGSKGFFIEPTVFSNVQDDMLIAKEEIFGPVQAILKFKDIEEVIRRSNDTRYGLAAGVFTKSGDTANQMMRALRVGTVWINCFDVFDAAIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAWL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2085g00006 534 FunFam Aldehyde dehydrogenase, putative 496 522 - -
Pral2085g00006 534 FunFam Mitochondrial aldehyde dehydrogenase 2 306 495 - -
Pral2085g00006 534 Pfam Aldehyde dehydrogenase family 62 524 IPR015590 GO:0016491
Pral2085g00006 534 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 38 524 - -
Pral2085g00006 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Pral2085g00006 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Pral2085g00006 534 SUPERFAMILY ALDH-like 49 527 IPR016161 GO:0016491
Pral2085g00006 534 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 58 332 - -
Pral2085g00006 534 CDD ALDH_F2BC 51 525 - -
Pral2085g00006 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 522 IPR016162 GO:0016491
Pral2085g00006 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 300 307 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2085g00006 Pral-Chr2085 21253 25232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2085g00006 1 534 Aldehyde Dehydrogenase Gene Family AT3G48000 78.253 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2085g00006 K00128 - gmx:100811501 933.71