Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2084g00002 ATGGGTTCTAAGATGGAAGGACCGTCTGCCCCAGCAATTCGACGAGATCCATATGAGGTATTGTCTGTGTCAAGGGACGCAAATGATCAGGACATTAAAACCGCTTACAGAAAACTCGCCCTCAAGTATCACCCTGACAAAAATGTTGACAATCCTGAAGCTTCAGAACTCTTTAAAGAGGTTGCATTTTCATACAGTATCTTGTCTGACCCAGAGAAGAGAAGGCAATATGACAGTGCTGGATTTGAGGCGCTTGAAGCAGACAGCATGGACATGGAAGTTGACTTGTCTAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGCTAGGTGTCCCTATCAAGACCACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGCACAGTTACAGTTAGACCCCTTCCAATTGGAACGTCAGTCAGTGGAAAGGTGGAGAAGCAAGGCGCTCATTTCTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGTCAGGGGTTGTCATAAGAGTCACGTCAACTGCACAAAGCAAATTCAAGTTGCTTTACTTTGAACATGATGCAAATGGTGGCTATGGCTTAGCATTGCAGGAAGACAGTGAAAAGACTGGCAAGGTGACATCCGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGATTGGATTCAACCGTGAATGCTTTGGCAATGGCAAAGGATCCTGAAGCTGCCTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCGGAACTAAAACCTGGCACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCCACCTACACCATTGAGGCGCTTTGTGCAAAATCATACGAGGATACCACCCAAAAACTTAAGGACATTGAGGCTAAAATTTTATTGAAAAGGAACGAGCTACGTCAATTTGAAACAGAATATAGAAAGGCATTAGCACACTATCAAGAAGTGACTGAAAGATACACCAAGGAAAAGCAAGCAGTAGACGAGCTTCTGAAGCAGAGAGATGGTATCCATTCTTGCTTCACTGTGTCCAGGACAATCATTTCTAGTGGGAATGGTAGTAATCTGAGTAATGGAAGTAGTAGCAGGAAATTTTCTGGTGAAGATTCCAAAGCAGACAGCCCTAAGGAAGATGGAAGCTCGGATGGCAAGGATAAATCTGGAAGAAAGAAATGGTTTAATCTCAATCTTAATGGGTCTGGTAAGAGAATGTTTTGA 1242 0.4243 MGSKMEGPSAPAIRRDPYEVLSVSRDANDQDIKTAYRKLALKYHPDKNVDNPEASELFKEVAFSYSILSDPEKRRQYDSAGFEALEADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQGAHFFGVTINEQQAESGVVIRVTSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRLDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTATYTIEALCAKSYEDTTQKLKDIEAKILLKRNELRQFETEYRKALAHYQEVTERYTKEKQAVDELLKQRDGIHSCFTVSRTIISSGNGSNLSNGSSSRKFSGEDSKADSPKEDGSSDGKDKSGRKKWFNLNLNGSGKRMF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2084g00002 413 MobiDBLite consensus disorder prediction 374 399 - -
Pral2084g00002 413 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Pral2084g00002 413 MobiDBLite consensus disorder prediction 360 413 - -
Pral2084g00002 413 Pfam DnaJ domain 16 78 IPR001623 -
Pral2084g00002 413 SUPERFAMILY Chaperone J-domain 15 86 IPR036869 -
Pral2084g00002 413 Gene3D DnaJ domain 5 99 IPR036869 -
Pral2084g00002 413 FunFam Chaperone protein dnaJ 16 2 98 - -
Pral2084g00002 413 CDD DnaJ 16 70 IPR001623 -
Pral2084g00002 413 PRINTS DnaJ domain signature 73 92 IPR001623 -
Pral2084g00002 413 PRINTS DnaJ domain signature 18 36 IPR001623 -
Pral2084g00002 413 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pral2084g00002 413 PRINTS DnaJ domain signature 36 51 IPR001623 -
Pral2084g00002 413 SMART dnaj_3 15 73 IPR001623 -
Pral2084g00002 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 410 - -
Pral2084g00002 413 Coils Coil 286 341 - -
Pral2084g00002 413 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2084g00002 Pral-Chr2084 28259 35297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2084g00002 9 88 C2H2 Transcription Factor Family AT1G74250 38.824 2.15e-11 63.9