Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2083g00004 GCCGGGAACATTCTAATTGATGCGCGCGGTGCAATCAAGCTGGGGGATTTCGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGTACAAGGAATACATTTGTGGGGACACCTTGCTGGATGGCACCTGAAGTCATGGAGCAACTGCATGGTTACGACTTCAAAGCAGATATGTGGTCTTTTGGTATAACAGCACTGGAGCTTGCCCATGGTCACGCTCCTTTCTCAAAGTATCCTCCCATGAAGGTACTTCTTATGACATTGCAAAATGCACCGCCTGGCCTTGATTATGAACGAGATAAGAAGTTCTCTCAGTCATTTAGGACGATGATTGCTAAATGCTTGGAAAAAGATCCTTCAAAACGACCCACTGCAAGCAGTTTGCTAAAGAATTCCTTCTTTAAGCGAGCTCGCTCTAGTGATTATATTTCGCGAACGCTTTTGGAGGGGCTGCCTGCATTAGGTGATCGCATCAAAGCCCTAAAGAGGAAAGAAGAAGATATGCTTGCAAAAGAACAAATTCCTGATGGGCAGAAGGAGGAAATATCACAGAATGAATACAAGCGAGGAATTAGTAGCTGGAACTTCAATCTTGAAGATATGAAAGCTCAGGCTTCATTGATACAGGATTTTGATGATGCAATGTCTGAAATCAATCCAGGAGGAAGTTCGAATTCCACATCACCAAATGATGTGCAAGAGAAGCAATCACCACGTGCAAACCAATCTCAACTTACTGACATGGAAGATAACGACGAGATGCGAAATCAATCAGCTCCTGTGCCTGCAGTAGATTTCACAACAACTGATGCCAAGGTTAGAAGTGAAAAATCTAATGATGCCTCTATCACCAGTTTAAGCCATGAACACAACTTATCACAGAGTGCTTCACCGCGTCTTGAAGATCATGTAGTGGACCATAATTTTAGTGAAAAATGTGATATGGAGAATGGGGGAAGACAGGTGGAGCCTACTCATTCTTACCACAGAAGATGTTCATCAAGCATCTTACCTGAAGTTACTCACACACCTGCTCGTGGGGAAATAGAGAAGATACATAATCTGTCCCATAGCGTTTCAAGTTGCAGTGCAACAACAGTACCACAGTCAGGAGAAGCTGCAAATTTGGACGACACTGATGAGAAAGTAAAGGTGCCAGTTGTTCAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGAATTAGAAAAGGTGGCCCCAACTCCTATTCTGCAAAAGAGTCAAAGCATGCAGGTTATTAGCTCGCACAATGTAACTCCTCTACCTTCAATTTTACCACTATCAACGACATCCCAGGCTACACCAACAAATGTTTCTGGTTCTTCGCTTTACCAATTATTGCTTTGTGTGCTGCAAGCAAATATCGAACAAAGGGACACTATCTTGCTTTTAATGAAACATGTAACCGCTGGTGACTCTACAGTTGATGGAGCATCTAACCAATCACCGGCTTCGGCAATGGAGAAATCTTTGCTTGAAGCATCTCACGAGAGAGAGAAAGAGCTACTTCATGAAATAACTGAGTTGAATAAGAGGCTCCGAAGTGACCAGGAACAGATTAAAAGATTGAAATCAGAAAACGCTCAGGTGTGA 1623 0.4301 AGNILIDARGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADMWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSQSFRTMIAKCLEKDPSKRPTASSLLKNSFFKRARSSDYISRTLLEGLPALGDRIKALKRKEEDMLAKEQIPDGQKEEISQNEYKRGISSWNFNLEDMKAQASLIQDFDDAMSEINPGGSSNSTSPNDVQEKQSPRANQSQLTDMEDNDEMRNQSAPVPAVDFTTTDAKVRSEKSNDASITSLSHEHNLSQSASPRLEDHVVDHNFSEKCDMENGGRQVEPTHSYHRRCSSSILPEVTHTPARGEIEKIHNLSHSVSSCSATTVPQSGEAANLDDTDEKVKVPVVQQRGRFKVTSENVELEKVAPTPILQKSQSMQVISSHNVTPLPSILPLSTTSQATPTNVSGSSLYQLLLCVLQANIEQRDTILLLMKHVTAGDSTVDGASNQSPASAMEKSLLEASHEREKELLHEITELNKRLRSDQEQIKRLKSENAQV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2083g00004 540 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2083g00004 540 MobiDBLite consensus disorder prediction 484 498 - -
Pral2083g00004 540 MobiDBLite consensus disorder prediction 280 300 - -
Pral2083g00004 540 MobiDBLite consensus disorder prediction 484 506 - -
Pral2083g00004 540 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
Pral2083g00004 540 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 534 IPR047173 GO:0043539
Pral2083g00004 540 MobiDBLite consensus disorder prediction 216 301 - -
Pral2083g00004 540 SMART serkin_6 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2083g00004 540 Coils Coil 502 540 - -
Pral2083g00004 540 MobiDBLite consensus disorder prediction 220 247 - -
Pral2083g00004 540 Pfam Protein kinase domain 3 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2083g00004 540 SUPERFAMILY Protein kinase-like (PK-like) 2 137 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2083g00004 Pral-Chr2083 25989 31273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2083g00004 1 522 MAP Kinase Kinase Kinase Kinase AT1G79640 54.312 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pral2083g00004 Pkinase 6.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2083g00004 K08835 - gmx:100780339 715.301