Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2082g00013 ATGGCGAGGAAGTGCTCGCATTGTGGGAAAACAGGACATAATTCTAGGACTTGCACATCTCCTAGAGGCACTTATGTAGGGCTTCGTCTCTTTGGTGTTCAGCTAGAAACTTCTTCTTCTGCTTCTGCTCCTTCTTCTTGTGTTTTTTCCATGAAGAAAAGCTTGAGCGTGGATTCTTTACCAGCTTCTTCATCTTCATCTTCTCCATCTTCCTCATTCTCTAATAATTCATCATCCAGAATCACCATTGATGAAAACTCTGAGAGATCCTCTATTGAGTATCTGTCAGATGGCCTAATAGATGCTGCAGCACAAGACAGAAGAAAAGGAATAGGTTGGACAGAAGATGAACACAGAAGATTTCTGGTTGGGCTCGAGAAGCTTGGGAAAGGAGATTGGAGAGGAATCTCCAGAAATTATGTCACAACAAGAACACCTACTCAAGTAGCTAGTCATGCTCAGAAATATTTTCTTCGACTCGCTGCTGTCAATAAGAAGAAGAGACGATCAAGCCTCTTTGACATGGCGGGTATAGAGGAGGATGTTAAATCTGCTATTGGAAGCTCGAAGAGTGAAGATAATGATCAGAAGGATCCTAGCTTGACATTGACGATGGGCCTAAGCTTGTTTGAAAAGAGAGATAAATCTGAAGTAAAAGTGCCGACGTGGCAGCATAATAATTCCCTGCAGATGAAATCTTCTTCTTCATCATCATCACCCACATCATCTCCTGATGATCTGGAGCTCACACTTGCAGGACCCAGCAAGTCATCATCATCTTCTTCTTTTCTTCTAAGCTCTATTTGTGTCACATAA 816 0.4216 MARKCSHCGKTGHNSRTCTSPRGTYVGLRLFGVQLETSSSASAPSSCVFSMKKSLSVDSLPASSSSSSPSSSFSNNSSSRITIDENSERSSIEYLSDGLIDAAAQDRRKGIGWTEDEHRRFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAAVNKKKRRSSLFDMAGIEEDVKSAIGSSKSEDNDQKDPSLTLTMGLSLFEKRDKSEVKVPTWQHNNSLQMKSSSSSSSPTSSPDDLELTLAGPSKSSSSSSFLLSSICVT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2082g00013 271 Gene3D - 111 163 - -
Pral2082g00013 271 MobiDBLite consensus disorder prediction 221 271 - -
Pral2082g00013 271 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Pral2082g00013 271 ProSiteProfiles Myb-like domain profile. 113 157 IPR001005 -
Pral2082g00013 271 SMART sant 109 159 IPR001005 -
Pral2082g00013 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 161 IPR017930 -
Pral2082g00013 271 Pfam Myb-like DNA-binding domain 113 157 IPR001005 -
Pral2082g00013 271 PANTHER TRANSCRIPTION FACTOR KUA1 3 239 - -
Pral2082g00013 271 CDD SANT 113 157 IPR001005 -
Pral2082g00013 271 ProSiteProfiles SANT domain profile. 113 161 IPR017884 -
Pral2082g00013 271 MobiDBLite consensus disorder prediction 60 84 - -
Pral2082g00013 271 SUPERFAMILY Homeodomain-like 107 160 IPR009057 -
Pral2082g00013 271 MobiDBLite consensus disorder prediction 220 271 - -
Pral2082g00013 271 NCBIfam myb-like DNA-binding domain, SHAQKYF class 109 159 IPR006447 GO:0003677
Pral2082g00013 271 FunFam transcription factor MYB1R1 111 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2082g00013 Pral-Chr2082 67396 68783 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral2082g00013 Myb_DNA-binding 8.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2082g00013 - - pcin:129293374 284.263