Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2081g00002 ATGGAGTGGGATCGAGGAGCGTCTCTTGGTACTGGAACCTTTGCTTCCGTTCACCTGGCCATTCCTAGAGTTATTTCTGCTCAATTTTCATCCCCTGCGGCCGTCAAGTCCGCTGATGTCTTCGCTTCTTCTTCCCTCCGGAACGAACAGGACGTATTTCATCGCCTTGGACCCTGCCCCCAAATCGTCAGGTGCTTCGGCCATGATTCTACCTTCGAAAACGGTGTTCAGTATTATAATCTGTTCCTGGAATACGCCGCCGGCGGCAGTCTTGCTGATCAGCTCAAAATTTGCGGCGGTCGGTTGCCGGAATCCGATGTCCGCCGATACACCAGGTCCATCGTTCGAGGACTCAGACATATTCACGCCAGCGGCTTCGTCCACTGTGATATAAAGCTTCCCAACATTCTTCTCTTTGCCAATGGCGACGTCAAGATTGCGGACTTTGGACTCGCCAAGAAGTCAGGGCCAGAACAGAGAAGCGAAGAAACCAAGTATGAGCTCAGGGGAACTCCTGCGTGTATGTCCCCGGAATCAGTAAATGACAATGAGTATGAATCTCCGGCCGATATATGGGCTCTCGGATGTGCCGTGGTGGAGATGGTCACCGGAAAACCCGCCTGGGATTTCAAGGACGGATCCAATATTTTCTCGCTGTTGATGCGGATTGGAGGGGGAGAAGAATTACCTGAAATTCCCAATGATTTATCAGACGATGGGAAGGATTTCCTTAGAAGGTGTCTGGTGAAGGATCCTAGAAAAAGATGGACGGCGGAGAAGCTCTCGGAGCATCCCTTTGTAGCCGACGAAACTGTTTCGTTAGAGCACGTCAAAGAACCGTGGACGTCGCCGAGAAGTCACTTCGATTTCCCAGACTGGGTTTCCAATACAACAACTTCTGCTCTGAATTCACCGGAATCTGATGACCGGTGTGAATGGAAATTTGAATCGTCGCGCCTATGCAGTACGTGTTCGCCGGAGGATAGGCTCCGGGAGCTGATGACGAATCAGACGCCAAATTGGTCGGAATCTGACAGTTGGATTTGTGTTAGATAG 1056 0.5095 MEWDRGASLGTGTFASVHLAIPRVISAQFSSPAAVKSADVFASSSLRNEQDVFHRLGPCPQIVRCFGHDSTFENGVQYYNLFLEYAAGGSLADQLKICGGRLPESDVRRYTRSIVRGLRHIHASGFVHCDIKLPNILLFANGDVKIADFGLAKKSGPEQRSEETKYELRGTPACMSPESVNDNEYESPADIWALGCAVVEMVTGKPAWDFKDGSNIFSLLMRIGGGEELPEIPNDLSDDGKDFLRRCLVKDPRKRWTAEKLSEHPFVADETVSLEHVKEPWTSPRSHFDFPDWVSNTTTSALNSPESDDRCEWKFESSRLCSTCSPEDRLRELMTNQTPNWSESDSWICVR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2081g00002 351 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 307 - -
Pral2081g00002 351 CDD STKc_MAPKKK 2 267 - -
Pral2081g00002 351 SUPERFAMILY Protein kinase-like (PK-like) 4 305 IPR011009 -
Pral2081g00002 351 Gene3D Transferase(Phosphotransferase) domain 1 93 310 - -
Pral2081g00002 351 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2081g00002 351 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Pral2081g00002 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Pral2081g00002 351 Pfam Protein kinase domain 6 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2081g00002 351 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Pral2081g00002 351 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2081g00002 Pral-Chr2081 12207 13555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2081g00002 1 351 MAP Kinase Kinase Kinase AT4G36950 51.977 3.31e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral2081g00002 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2081g00002 - - qsa:O6P43_024626 467.618