Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral207g00010 ATGGGATTCAATCGTATCACTGGAAGCATACCTAATGAGATTGGGCAACTAGATGGATTAACCACCCTTGGTTTAGAACATAACTTCCTCCAACGCACAGTTCCACATTCAATTAGAAAGCTTGAAAATCTTGGGGAGTTATTGCTATTAGGAAATCAACTATCTGGTAGGATTCCTGATATCTTTGGAAATCTTACTAAGTTGTTTACACTTATGTTGTCTATAAATAATTTCGAGGGAACTATTCCAATAAGCCTCAAATATTGCAAAGGTATGCAACTCTTGGACATAAGTCATAATAACTTGAGCGGGAATATACCAAAGCTAACATTTGGTCAATTAGAAAGCATAATTCATCTTGACTTGTCTTCCAATTCCTTGATTGGTCCCATTCCATCTGAGATTGGTAACATGAAGCAATTAGTGGAATTACGTCTGAGTGAAAATAGTTTTTCTGGTGATATTCCAATGGAACTTGGAAAATGCATACAAGTGACGGATCTTGATATGAGTGGGAACTTCCTTCATGGAACTATCCCCTCATCATTCAGTTCCTTGAAATCCCTCGTCAACTTAGACCTTTCCAACAATAACTTGTCAGGCACAATCCCACAACAACTAAAAGATCTTCCAATATTGAAGACTTTGAACCTATCTCACAACCATTTTTATGGTGAGGTTCCAAAAGGAGGAGCGTTTGATAATATCACAGCTATTTCACTCACGGGAAACGAGGATCTCTGTGGTGGTATACCTCAACTAAAGCTACCTACATGCCCAAGAAGCTTTGGTTCTGTATATAAAGGAACTCTTCGGCACTTTGAAGGTTTTATTGCCGTGAAGGTGCTCAATCTTCAAGCACATGGGGCATCAAAGAGTTTCATCACAGAATGCAAGACTCTTAGTAATGTCCGGCATAGGAATCTTTTGAAGATTCTGACTTCATGTTCAAGCGTTGATTACAATGGCAATGATTTTAAGGCCCTTGTTTATGAGTTCATGCCTAACGGGAGCTTGGAGAATTGGTTGTTGGCGAATGAACTTGATGAACCTAGAGATCTACATTTGAATTTCGAACAAAGATTGGATGTAGCCATATATGTGGCTCATGCTTTGGATTATCTTCATCATGGTTTTGAGGAAACTATCGTTCATTGTGAGATCAAGCCAAGTAATGTTCTTCTTAGTGATGATATGGTTGCACACTTAGGAGACTTTGGATTAGCTAGGCTTCTTCATGAAGTTACAAGCTACTCTAGTGTGGGCCAAACTACATCTTCGGCAATTAAGGGAACAATTGGCTATATTCCTCTAGAGTATGGAGAAAGTGTCCAAGTTACAACAAAAGGGGATATCTACAGCTATGGGATTCTTATGCTTGAGATGCTCACTGGAAAGAAGCCGACATATAGCATGTTTCGTGAGGATCTAAGCCTATCCAAATTCTGCATGCTAGCGTTACCTGATAGAATCTTTCAGATTATGGATCCAAATTTGCTTGTTCTATCTGATAGAGACCATAGGAAAATTATGCAGAATTCAAATATGGAATGCAACATTCAAGAGTGTCTGGCTAGCTTTGCTAGGATTGGTGTGGCATGCTGTGCAGAATTGCCAGGTGAAAGAATGGATATCAAAGATGTTTTCGCAGAGTTGCTTGCAATTAAGCAAAAACTATCCACTTTCAACATTGTCATATGA 1701 0.3892 MGFNRITGSIPNEIGQLDGLTTLGLEHNFLQRTVPHSIRKLENLGELLLLGNQLSGRIPDIFGNLTKLFTLMLSINNFEGTIPISLKYCKGMQLLDISHNNLSGNIPKLTFGQLESIIHLDLSSNSLIGPIPSEIGNMKQLVELRLSENSFSGDIPMELGKCIQVTDLDMSGNFLHGTIPSSFSSLKSLVNLDLSNNNLSGTIPQQLKDLPILKTLNLSHNHFYGEVPKGGAFDNITAISLTGNEDLCGGIPQLKLPTCPRSFGSVYKGTLRHFEGFIAVKVLNLQAHGASKSFITECKTLSNVRHRNLLKILTSCSSVDYNGNDFKALVYEFMPNGSLENWLLANELDEPRDLHLNFEQRLDVAIYVAHALDYLHHGFEETIVHCEIKPSNVLLSDDMVAHLGDFGLARLLHEVTSYSSVGQTTSSAIKGTIGYIPLEYGESVQVTTKGDIYSYGILMLEMLTGKKPTYSMFREDLSLSKFCMLALPDRIFQIMDPNLLVLSDRDHRKIMQNSNMECNIQECLASFARIGVACCAELPGERMDIKDVFAELLAIKQKLSTFNIVI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral207g00010 566 PRINTS Leucine-rich repeat signature 189 202 - -
Pral207g00010 566 PRINTS Leucine-rich repeat signature 210 223 - -
Pral207g00010 566 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 334 563 - -
Pral207g00010 566 SUPERFAMILY Protein kinase-like (PK-like) 262 552 IPR011009 -
Pral207g00010 566 ProSiteProfiles Protein kinase domain profile. 252 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral207g00010 566 PANTHER OS04G0122200 PROTEIN 262 557 - -
Pral207g00010 566 Gene3D Ribonuclease Inhibitor 1 261 IPR032675 -
Pral207g00010 566 Gene3D Transferase(Phosphotransferase) domain 1 334 563 - -
Pral207g00010 566 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 262 - -
Pral207g00010 566 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Pral207g00010 566 Pfam Leucine rich repeat 95 150 IPR001611 GO:0005515
Pral207g00010 566 Pfam Protein tyrosine and serine/threonine kinase 262 476 IPR001245 GO:0004672|GO:0006468
Pral207g00010 566 SUPERFAMILY L domain-like 2 249 - -
Pral207g00010 566 Gene3D Phosphorylase Kinase; domain 1 262 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral207g00010 Pral-Chr207 136600 138751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral207g00010 4 559 Receptor kinase-like Gene Family AT3G47580 35.194 1.12e-106 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral207g00010 PK_Tyr_Ser-Thr 2.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral207g00010 - - mtr:11438431 510.76