Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral207g00004 CAACTAAAAGATCTTCCAATATTGGAGACCTTGAACCTATCTCACAACCATTTTTATGGTGAGGTTCCAAAAGGAGGGGTGTTTGGTAACATCACAGCTATTTCATTCACAGGAAATGATAATCTTTGTGGTGGAATTGCTCAACTAAAGCTACCTACATGCCCAAGTAAGGGGAAGAAGCATTTCAAAATCATTATCCTTATCATTGTGGTAAGTAGTTCCCTTGCTTCTTTTGCAATTTTCCTGATCATTTGCAAGAGAAGAAGACGGAGAAAATTGTCCTCCTCCACATATTCCCCACAAAATGCTCATTTGAGGGTTTCTTATAAAGAGCTACATGATGCAACTGATGGATTTTCTTCATCCAGTTTGGTTGGTGTAGGAAGCTTTGGTTATGTATACAAAGGAACTCTTCAACACTTTGAAGGTTTTGTTGCTGTGAAGGTGCTAAATCTTCAAGTACATGGGGTGTCAAAGAGTTTCATCACAAAATGCAAAACTCTTAGTAAAGTCCGGCATAGGAATCTTTTAAAGATTCTGACTTCATGTTCAAGGGTTGATTACAATGGCAATGATTTTAAGGCCCTTGTTTATGAGTTCATGCCTAACGGGAGCTTGGAGAATTGGTTGTCTGCAAACAAACTTGGTCAACCCAAAAATTTATATATGAATTTCAAACAAAGATTGGATGTAGCTATTGATGTGGCTCATGCTTTGGATTATCTTCATCATGGTTTTGAGGAAACTATTGTTCATTGTGATATCAAGCCAAGTAATGTTCTTCTTAGTGATGATATGGTCGCACACTTAGGAGATTTTGGATTGGCTAGGCTTCTTCATGAAGTTACAGGCTACTCTGATGAGGGCCAAACTACATCTTCAGCAATTAAGGGAACAATTGGGTATATTCCTCCAGAGTATGGAAAAAGTGTCCAAGTTACAACAAAAGGGGATATCTACAGCTATGGGATTCTGTTGCTAGAGATGCTCACTGGAAAGAAGCCAACAGATAGTGTGTTTCGTGAGGATTTAAGCCTACCCAAATTCTGCAAGCTAGCATTACTAGATGGAGTCCTTGAGATTGTGGATCCAAATTTGCTTATTCTATCTAATAGAGGCCAAAGGAAAGTTACGTTGAATTCAAATACAGAGCAAAAAATTGAAGAGTGTCTTGCTAGCTATGCGGGGATTGGAGTGGCATGTTGTGCAAAATTGCCTGGTGAAAGAATGGGTACCAAAGATGTTGTTAGCAGAGTTGCTTGCAATTAA 1269 0.3877 QLKDLPILETLNLSHNHFYGEVPKGGVFGNITAISFTGNDNLCGGIAQLKLPTCPSKGKKHFKIIILIIVVSSSLASFAIFLIICKRRRRRKLSSSTYSPQNAHLRVSYKELHDATDGFSSSSLVGVGSFGYVYKGTLQHFEGFVAVKVLNLQVHGVSKSFITKCKTLSKVRHRNLLKILTSCSRVDYNGNDFKALVYEFMPNGSLENWLSANKLGQPKNLYMNFKQRLDVAIDVAHALDYLHHGFEETIVHCDIKPSNVLLSDDMVAHLGDFGLARLLHEVTGYSDEGQTTSSAIKGTIGYIPPEYGKSVQVTTKGDIYSYGILLLEMLTGKKPTDSVFREDLSLPKFCKLALLDGVLEIVDPNLLILSNRGQRKVTLNSNTEQKIEECLASYAGIGVACCAKLPGERMGTKDVVSRVACN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral207g00004 422 PANTHER OS04G0122200 PROTEIN 2 406 - -
Pral207g00004 422 SMART serkin_6 119 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral207g00004 422 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 201 421 - -
Pral207g00004 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pral207g00004 422 Gene3D Phosphorylase Kinase; domain 1 100 200 - -
Pral207g00004 422 Gene3D Ribonuclease Inhibitor 1 63 IPR032675 -
Pral207g00004 422 Pfam Protein kinase domain 121 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral207g00004 422 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Pral207g00004 422 ProSiteProfiles Protein kinase domain profile. 119 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral207g00004 422 FunFam LRR receptor-like serine/threonine-protein kinase EFR 90 200 - -
Pral207g00004 422 SUPERFAMILY Protein kinase-like (PK-like) 98 417 IPR011009 -
Pral207g00004 422 Gene3D Transferase(Phosphotransferase) domain 1 201 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral207g00004 Pral-Chr207 68831 70538 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral207g00004 8 419 Receptor kinase-like Gene Family AT3G47570 43.925 1.92e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral207g00004 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral207g00004 - - gmx:100777490 456.447