Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00121 ATGGGTGATTTGAAAGTACTGGAAGCGAAGGAGAGTGAGAAGGAGAAGGAGAAGGAGAAAACAGAGGACGAGGAGGAAAGTGGAACAGAGAGTAAAGAGGGTGAATTGAATGGTCTGATGAGGTGGGAGAAATTCTTGCCCAAGATGGTATTGAGGGTTCTCTTGGTTGAAGCTGATGATTCCACCCGCCAGATTATCACTGCGCTTCTCAGGAAATGCAGCTACAGAGTGACTGCTGTTCCTGATGGCCTGAAAGCTTGGGAAATGCTGAAGGGAAGGTCGCACAATATTGATCTAATACTGACAGAAGTAGATTTGCCTTCCATATCTGGCTATGCGCTTCTGACCTTAATTATGGAGCATGAGATTTGCAAAATCATTCCTGTTATAATGATGTCCTCGCAAGATTCGATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTTAAGCCCATTAGGAAAAATGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGGCGATCATCAATAATCAGTTTAAATGGTCTCCAAGATGAGGGTGTTGCTCAACAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGTCGTTCAAGTGGAGATGCCGCATGCATTCAAAAAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGTACAAAGCCTGATTTGGAAGCTGAAACTGCCCCTACGGAAAATGTTGAAGAATTTGCTCATCTAAGATGTGGTGACTCGTGTCCGAGTGATGAAAAGATTCAGGAGGTTGAAACTTGCATTCATTTAGGCCTCACATCGATTGTGCATGATAATCATGCTGGAGGATCAACTTTGGGCATCTGCAAAAATGGTAAGACAGGCACAGCTCATGGCACCAATGGCTGTCCAGAGAATAGGAGTGCTAGTATCGGTGGTGAAACTCATGATAATCACTATGTTCAAATTAGCTCTTCCCAGGAAGCTATTGACTTGATTGGAGCATTCCATGCTCATCCAAAATGCAGTCCCAAAAGTTCCACAGTCAATTGCACGGGCATGTTTGACTTCTCTCCACAGTTAGATCTTTCCTTGAGAAGAGATCATCCCAGCAGCTTTGAGAATGAAATCTCCAAAGATAGGCAAACCCTCGTGCATTCCGATGCCTCAGCTTTCAAATGGTATACCAGCAGACAGTTGCAAGCACCACCAACAGGTCTCACTAACTTTTGTGATATAGAAAAAGAACAGGGAACAAATTGTGACAAAAATAACTCTTACGTTGCTACTGGCTATAACTCAGATAGTTCAACACCGAGTATGCAAAGAAGTATTGTGTCACCCACTACGGCCCAATCTAAAGAATCTAAACTCGCAACTTCATTCTCAGAGCAGCCGCGTTCCCTCCCAATTCCAGTAAGGGGAATAAGGTTCAACGATCTATGCAAAGCCTATGGTTCTGTCCCTCCTCCTATGTTTTCTACGCGGTCAGATCCACCATTAGGGCCAAATCCAACATCTGCTGTGTCTACCTTTCAAGCGAATGCATATTGTCTGTCTAATGGCAAAAATAGTTCAGAGCAGCTTTATGAAGCTCGAGGTCAAAGTGGAAAGAACCTTGCAAGCCACATTGTTTATGTGCAGGATCACAAGTTGGAACATGTGGAAGATCGAGGACATATTTCTCCTGCAACCGATCTAAGCAGAAGCAGTAGTTTCTGCAATGGAAATTTGAGTCGCATGAACAGCATTGGCTACGGCAGCAACTGTGGAAGTAATGGCAACGTTGATCAGGCTGTCATAGTCAGGACTGCATCAGAGGTGAAGAATGAAGATCTCACAAACAATGCAAATTCTCATCGATCCATCCAAAGAGAAGCAGCCCTCAACAAGTTTCGTTTGAAAAGGAAAGAGAGATGTTATGAGAAGAAGGTTCGGTATGAAAGCAGAAAGAGACTTGCAGAGCAGCGTCCCAGGGTGAAAGGACAATTTGTTCAAGTGCACCATGAACCTCAGGCTGCAGGCAAAGATGGCTGA 2037 0.4399 MGDLKVLEAKESEKEKEKEKTEDEEESGTESKEGELNGLMRWEKFLPKMVLRVLLVEADDSTRQIITALLRKCSYRVTAVPDGLKAWEMLKGRSHNIDLILTEVDLPSISGYALLTLIMEHEICKIIPVIMMSSQDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRRRSSIISLNGLQDEGVAQQKVEATAENNAASRSSGDAACIQKNKELIEKGSDAQSSCTKPDLEAETAPTENVEEFAHLRCGDSCPSDEKIQEVETCIHLGLTSIVHDNHAGGSTLGICKNGKTGTAHGTNGCPENRSASIGGETHDNHYVQISSSQEAIDLIGAFHAHPKCSPKSSTVNCTGMFDFSPQLDLSLRRDHPSSFENEISKDRQTLVHSDASAFKWYTSRQLQAPPTGLTNFCDIEKEQGTNCDKNNSYVATGYNSDSSTPSMQRSIVSPTTAQSKESKLATSFSEQPRSLPIPVRGIRFNDLCKAYGSVPPPMFSTRSDPPLGPNPTSAVSTFQANAYCLSNGKNSSEQLYEARGQSGKNLASHIVYVQDHKLEHVEDRGHISPATDLSRSSSFCNGNLSRMNSIGYGSNCGSNGNVDQAVIVRTASEVKNEDLTNNANSHRSIQREAALNKFRLKRKERCYEKKVRYESRKRLAEQRPRVKGQFVQVHHEPQAAGKDG 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00121 678 CDD psREC_PRR 53 156 - -
Pral2077g00121 678 MobiDBLite consensus disorder prediction 1 27 - -
Pral2077g00121 678 SUPERFAMILY CheY-like 51 181 IPR011006 -
Pral2077g00121 678 MobiDBLite consensus disorder prediction 1 34 - -
Pral2077g00121 678 PANTHER TWO-COMPONENT RESPONSE REGULATOR 51 234 IPR045279 GO:0009736
Pral2077g00121 678 SMART REC_2 51 166 IPR001789 GO:0000160
Pral2077g00121 678 ProSiteProfiles Response regulatory domain profile. 52 170 IPR001789 GO:0000160
Pral2077g00121 678 Gene3D - 49 275 - -
Pral2077g00121 678 Coils Coil 4 27 - -
Pral2077g00121 678 Pfam Response regulator receiver domain 53 164 IPR001789 GO:0000160
Pral2077g00121 678 MobiDBLite consensus disorder prediction 651 678 - -
Pral2077g00121 678 ProSiteProfiles CCT domain profile. 625 667 IPR010402 GO:0005515
Pral2077g00121 678 Pfam CCT motif 625 666 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00121 Pral-Chr2077 572237 576537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00121 324 673 Response Regulator Gene Family AT5G24470 30.084 2.46e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral2077g00121 Response_reg 1.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00121 K12130 - gmx:100777119 903.664