Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00120 ATGGGTGATTTGAAAGTACTGGAAGCGAAGGAGAGTGAGAAGGAGAAGGAGAAGGAGAAAACAGAGGACGAGGAGGAAAGTGGAACAGAGAGTAAAGAGGGTGAATTGAATGGTCTGATGAGGTGGGAGAAATTCTTGCCCAAGATGGTATTGAGGGTTCTCTTGGTTGAAGCTGATGATTCCACCCGCCAGATTATCACTGCGCTTCTCAGGAAATGCAGCTACAGAGTGACTGCTGTTCCTGATGGCCTGAAAGCTTGGGAAATGCTGAAGGGAAGGTCGCACAATATTGATCTAATACTGACAGAAGTAGATTTGCCTTCCATATCTGGCTATGCGCTTCTGACCTTAATTATGGAGCATGAGATTTGCAAAATCATTCCTGTTATAATGATGTCCTCGCAAGATTCGATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTTAAGCCCATTAGGAAAAATGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGGCGATCATCAATAATCAGTTTAAATGGTCTCCAAGATGAGGGTGTTGCTCAACAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGTCGTTCAAGTGGAGATGCCGCATGCATTCAAAAAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGTACAAAGCCTGATTTGGAAGCTGAAACTGCCCCTACGGAAAATGTTGAAGAATTTGCTCATCTAAGATGTGGTGACTCGTGTCCGAGTGATGAAAAGATTCAGGAGGTTGAAACTTGCATTCATTTAGGCCTCACATCGATTGTGCATGATAATCATGCTGGAGGATCAACTTTGGGCATCTGCAAAAATGGTAAGACAGGCACAGCTCATGGCACCAATGGCTGTCCAGAGAATAGGAGTGCTAGTATCGGTGGTGAAACTCATGATAATCACTATGTTCAAATTAGCTCTTCCCAGGAAGCTATTGACTTGATTGGAGCATTCCATGCTCATCCAAAATGCAGTCCCAAAAGTTCCACAGTCAATTGCACGGGCATGTTTGACTTCTCTCCACAGTTAGATCTTTCCTTGAGAAGAGATCATCCCAGCAGCTTTGAGAATGAAATCTCCAAAGATAGGCAAACCCTCGTGCATTCCGATGCCTCAGCTTTCAAATGGTATACCAGCAGACAGTTGCAAGCACCACCAACAGATAGTTCAACACCGAGTATGCAAAGAAGTATTGTGTCACCCACTACGGCCCAATCTAAAGAATCTAAACTCGCAACTTCATTCTCAGAGCAGCCGCGTTCCCTCCCAATTCCAGTAAGGGGAATAAGGTTCAACGATCTATGCAAAGCCTATGGTTCTGTCCCTCCTCCTATGTTTTCTACGCGGTCAGATCCACCATTAGGGCCAAATCCAACATCTGCTGTGTCTACCTTTCAAGCGAATGCATATTGTCTGTCTAATGGCAAAAATAGTTCAGAGCAGCTTTATGAAGCTCGAGGTCAAAGTGGAAAGAACCTTGCAAGCCACATTGTTTATGTGCAGGATCACAAGTTGGAACATGTGGAAGATCGAGGACATATTTCTCCTGCAACCGATCTAAGCAGAAGCAGTAGTTTCTGCAATGGAAATTTGAGTCGCATGAACAGCATTGGCTACGGCAGCAACTGTGGAAGTAATGGCAACGTTGATCAGGCTGTCATAGTCAGGACTGCATCAGAGGTGAAGAATGAAGATCTCACAAACAATGCAAATTCTCATCGATCCATCCAAAGAGAAGCAGCCCTCAACAAGTTTCGTTTGAAAAGGAAAGAGAGATGTTATGAGAAGAAGGTTCGGTATGAAAGCAGAAAGAGACTTGCAGAGCAGCGTCCCAGGGTGAAAGGACAATTTGTTCAAGTGCACCATGAACCTCAGGCTGCAGGCAAAGATGGCTGA 1950 0.4441 MGDLKVLEAKESEKEKEKEKTEDEEESGTESKEGELNGLMRWEKFLPKMVLRVLLVEADDSTRQIITALLRKCSYRVTAVPDGLKAWEMLKGRSHNIDLILTEVDLPSISGYALLTLIMEHEICKIIPVIMMSSQDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRRRSSIISLNGLQDEGVAQQKVEATAENNAASRSSGDAACIQKNKELIEKGSDAQSSCTKPDLEAETAPTENVEEFAHLRCGDSCPSDEKIQEVETCIHLGLTSIVHDNHAGGSTLGICKNGKTGTAHGTNGCPENRSASIGGETHDNHYVQISSSQEAIDLIGAFHAHPKCSPKSSTVNCTGMFDFSPQLDLSLRRDHPSSFENEISKDRQTLVHSDASAFKWYTSRQLQAPPTDSSTPSMQRSIVSPTTAQSKESKLATSFSEQPRSLPIPVRGIRFNDLCKAYGSVPPPMFSTRSDPPLGPNPTSAVSTFQANAYCLSNGKNSSEQLYEARGQSGKNLASHIVYVQDHKLEHVEDRGHISPATDLSRSSSFCNGNLSRMNSIGYGSNCGSNGNVDQAVIVRTASEVKNEDLTNNANSHRSIQREAALNKFRLKRKERCYEKKVRYESRKRLAEQRPRVKGQFVQVHHEPQAAGKDG 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00120 649 CDD psREC_PRR 53 156 - -
Pral2077g00120 649 MobiDBLite consensus disorder prediction 1 27 - -
Pral2077g00120 649 Pfam Response regulator receiver domain 53 164 IPR001789 GO:0000160
Pral2077g00120 649 Pfam CCT motif 596 637 IPR010402 GO:0005515
Pral2077g00120 649 PANTHER TWO-COMPONENT RESPONSE REGULATOR 51 236 IPR045279 GO:0009736
Pral2077g00120 649 MobiDBLite consensus disorder prediction 1 34 - -
Pral2077g00120 649 SMART REC_2 51 166 IPR001789 GO:0000160
Pral2077g00120 649 ProSiteProfiles Response regulatory domain profile. 52 170 IPR001789 GO:0000160
Pral2077g00120 649 ProSiteProfiles CCT domain profile. 596 638 IPR010402 GO:0005515
Pral2077g00120 649 SUPERFAMILY CheY-like 51 181 IPR011006 -
Pral2077g00120 649 Coils Coil 4 27 - -
Pral2077g00120 649 MobiDBLite consensus disorder prediction 399 434 - -
Pral2077g00120 649 MobiDBLite consensus disorder prediction 622 649 - -
Pral2077g00120 649 Gene3D - 49 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00120 Pral-Chr2077 572234 576537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00120 324 644 Response Regulator Gene Family AT5G24470 32.931 1.71e-25 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral2077g00120 Response_reg 1.3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00120 K12130 - gmx:100777119 860.522