Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00104 ATGGGGAAGGCAGGAGGAAGCTCTTGGTTGGCAGCTGTGAGAAGGGCTTTCAGGTCTCCTACCAAAGAAAAGGACAAGAAAAGCAACAGGACAAGAGAAGAGCACGAACAGGAGGAGGAGGAAAAGAAGAGGGGAAAAAGAACATGGATGTTCAGAAACCCCTTCGGCCAAGAGACAACAGCGCAGCATTGCTTAGAAAGAACCATAATAACAAGTACAGCCGATGTGATGGCAACAAGTTGTGATGCAGAGCAAAGACATGCGATTGCAGTGGCCATGGCAACCACAGCAGCTGCTGAGGCAGCGTTAGCAACCGCTCAAGCGGCTGTGGAGGTCGTTCGCCTTTCTAAGCCCTCCTTCTTTGTCAGACAACGCAAGGCAGCCATCGTAATCCAAACAGCTTTCAGAGGCTATCTGGCCAGGAGAGCTCTTGGGGCACTTAAGGGATTGGTGAAGCTGCAAGCATTAGTGAGAGGTCATAACGTGCGAAAACGAGCTAAACTAACACTGGAGTGCATGCAAGCTCTTATTCGAGCTCAAACACGAGTATGCCAACAGCGAGCCAAGCGTCTCTCACAACATGAAAGAGCCACAGATTCCACAGACGAGAGTGGGACAGAGGAAGTGCGGATGCGCTGGGATGACCACCCACGAACAGTAGATAACATTCGAGCTGTTCTACAAAGAACAAGGCAAGCTGCCTTGAGACGTGATATTTCCCTGGCTGATGCCTTCTCCCATCAGATATGGACAACTGGTCGGGAAACATGCACCAGCGAGGAAGAGGTAGAGGACAGAGACGGTCCAAGGTGGAGGAGAAGGTATAGAGGGAACAGAGGCAGAGCTTTGTGTGATCAAAGAGACCCCATCAAAATAGTTGAAATCGATACATACAGTCCTTACTCTGATCATGTTCCCACTGATAAACCTGAGTTTATTAAACCACCGAGAATTTCGCCCAGCAAAGCCCACTACGAGATCCCAATGGCAATGACATCACCGTCGACGAAGATGAAGCATGTTGAGATGCATTCAGCTAGGACTACGCCTCGTGTGAAGCCCAATACTTTGATGCCAAACTATATGGCAGCCACTGCATCTGCGAAGGCTCGGTCTCGCTCACAAAGCGCCCTCAGGAACTCAACCTCCGAGGAGGATGAAATGGGATCCATTAGGAAATGCCTTTCGTTCCCAGCTCCTAATTCTTGTGATGGTTTCGACCCTTGA 1227 0.4988 MGKAGGSSWLAAVRRAFRSPTKEKDKKSNRTREEHEQEEEEKKRGKRTWMFRNPFGQETTAQHCLERTIITSTADVMATSCDAEQRHAIAVAMATTAAAEAALATAQAAVEVVRLSKPSFFVRQRKAAIVIQTAFRGYLARRALGALKGLVKLQALVRGHNVRKRAKLTLECMQALIRAQTRVCQQRAKRLSQHERATDSTDESGTEEVRMRWDDHPRTVDNIRAVLQRTRQAALRRDISLADAFSHQIWTTGRETCTSEEEVEDRDGPRWRRRYRGNRGRALCDQRDPIKIVEIDTYSPYSDHVPTDKPEFIKPPRISPSKAHYEIPMAMTSPSTKMKHVEMHSARTTPRVKPNTLMPNYMAATASAKARSRSQSALRNSTSEEDEMGSIRKCLSFPAPNSCDGFDP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00104 408 MobiDBLite consensus disorder prediction 1 47 - -
Pral2077g00104 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 167 IPR027417 -
Pral2077g00104 408 Pfam IQ calmodulin-binding motif 151 167 IPR000048 GO:0005515
Pral2077g00104 408 Pfam IQ calmodulin-binding motif 125 143 IPR000048 GO:0005515
Pral2077g00104 408 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
Pral2077g00104 408 MobiDBLite consensus disorder prediction 189 210 - -
Pral2077g00104 408 MobiDBLite consensus disorder prediction 366 408 - -
Pral2077g00104 408 MobiDBLite consensus disorder prediction 17 47 - -
Pral2077g00104 408 Pfam Protein of unknown function (DUF4005) 334 404 IPR025064 -
Pral2077g00104 408 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Pral2077g00104 408 Gene3D - 122 173 - -
Pral2077g00104 408 MobiDBLite consensus disorder prediction 367 384 - -
Pral2077g00104 408 SMART iq_5 146 167 IPR000048 GO:0005515
Pral2077g00104 408 SMART iq_5 123 145 IPR000048 GO:0005515
Pral2077g00104 408 Coils Coil 21 48 - -
Pral2077g00104 408 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00104 Pral-Chr2077 520621 522239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00104 1 400 IQD Protein Family AT1G01110 37.708 2.06e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00104 - - cave:132174964 347.436