Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00102 ATGGGTGAATTTGGCGTTTGGGACGAGGAAGCGGCAAAAAATAGCAGTAATGGTGGTGTTGGGGTGGGTATGAAGGTGCAGAAGCAGAACTTCGAAGCATTTTCTAGTAAGACCATGATGATGATGGCTCCTCCTCCTCATAATCATCACGATCCTCTGCTATATGGTCCGTCCTTCGCTGCTGCCGGTGATGGTGATGGTGATGGTCCTACAACTTGTAAGTCCCTGACTAATTATGCAAATCATTTTGGTAATGGTGCTTCTGCTTCTGCTTCTGGTGCTGCGCATGTTAGACCCTTGCAGCCTTTTCACGTTTCTGCTTCAACCGCCTTCAAATCCTCAGCAGGAGGGGCGATGGCGGCTTCATTGGGATTTCCTTTCACAACAGCACAGTGGAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGACGGCTGCTATACCTGTTCCTCCTCAGCTGCTTATCCCCGTGCCTGCTTCTCGCTCTCACTTGGATACTGGTTTCAATCTAAGGTTTTCAAGCAGCAGTGATGCAGAGCCAGGGAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGTTCAAGAGACGTAGCCCCTAACCACAAGTATTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAACTCGAGGCACCACCAACAATAATCAGCAAATCAACAGAACTAGCCAAGATTATCTTTCTTTGCCTGCTCCTACCATGACTATCTCTAACTCTACAATCCGTACGCATGGATCTTCATCTCCGTTTCTTGCCTCTACTACGGCCAGTCAGCCGTACTTTGAATCTTCCCTTTCTCTTGATAAGCTTGGCGTCAAAGCTGCAAATTTTGATTCCCTTGCTTCTGTTCCAAGAGGCGGGGACCGGATGCTGAAAGGAGACCATAATACCATGGATCTACAATGGCATCCTCTGATACAGAACAAACTTGCATTGAATACGGGAGTTTCTGTAACGACGACGCCTCAATTTCAATCACTCGTTCCAAAGGCCCTCTATGTGCGAATTCGTATGATGGTTTCAGTTCTGAACGGGACCTACACAACAAGCGCCCCGCTTTGCACCTCAATCCTCTAG 1119 0.4772 MGEFGVWDEEAAKNSSNGGVGVGMKVQKQNFEAFSSKTMMMMAPPPHNHHDPLLYGPSFAAAGDGDGDGPTTCKSLTNYANHFGNGASASASGAAHVRPLQPFHVSASTAFKSSAGGAMAASLGFPFTTAQWKELERQAMIYKYMTAAIPVPPQLLIPVPASRSHLDTGFNLRFSSSSDAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVETRGTTNNNQQINRTSQDYLSLPAPTMTISNSTIRTHGSSSPFLASTTASQPYFESSLSLDKLGVKAANFDSLASVPRGGDRMLKGDHNTMDLQWHPLIQNKLALNTGVSVTTTPQFQSLVPKALYVRIRMMVSVLNGTYTTSAPLCTSIL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00102 372 MobiDBLite consensus disorder prediction 1 21 - -
Pral2077g00102 372 Pfam WRC 180 222 IPR014977 -
Pral2077g00102 372 MobiDBLite consensus disorder prediction 211 235 - -
Pral2077g00102 372 ProSiteProfiles WRC domain profile. 179 223 IPR014977 -
Pral2077g00102 372 ProSiteProfiles QLQ domain profile. 126 161 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral2077g00102 372 PANTHER GROWTH-REGULATING FACTOR 5 102 271 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral2077g00102 372 Pfam QLQ 126 159 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral2077g00102 372 SMART QLQ_2 125 161 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00102 Pral-Chr2077 514637 517565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00102 114 256 GRF Transcription Factor Family AT5G53660 51.049 1.27e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral2077g00102 WRC 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00102 - - pcin:129294126 456.062