Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00099 ATGACAACAGCCGTAGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAGGCCTTGTCTGGTCATAAAAATGTAGTCAAGTTTCATGATGCATTTGAGGATGCCAATAACGTCTACATAGTGATGGAATTGTGCGATGGAGGCGAACTACTTGACAGAATTCTCTCAAGAGGGGGAAGATACACAGAAGAAGATGCTAAAACTATTCTTTTTCAAGCTCTAAACGTAATAGCCTATTGTCATCTTCAAGGAGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTCTTTGTCTCAAAAGATGATGATTCTCAGATGAAGCTTATAGACTTCGGTCTATCTGATTTCGTGAGACCAGGTGAACGTCTGAGCGATGTTGTTGGCAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGATTTATGGAGTATTGGGGTTATAACATACATATTATTATGTGGAAGCAGACCATTCTGGGCACGCTCTGAATCAGGAATCTTTCGGTCTGTGCTAAAAGCTAATCCTAACTTCGATGATTCACCTTGGCCGTCTGTATCACCAGAGGCTAAAGACTTTGTAAAGAGACTCTTGAACAAGGATCTCAGGAAAAGGATGACCGCTGCCCAAGCATTAACTCACCCGTGGTTGAAAAATGAAAATCAAGCCATTCCATTAGACATTTTTATCTACAAGCAAGTCAAATCATATTTGCATGCCACGCCTCTAAGACGTGCAGCACTCAAGGCTCTCTCTAAAGCGTTGACAGAAGATGAGCTTATATACCTTAGAGCACAGTTTAGCCTCTTGGGACCAAAAAATGGTCGCGTTTCGCTTGACAATTTTCGAGCGGCTCTGATGAAAAATGCAACTGGTATCATGAAGGAAGCCCCGGACATTTTAAACTTGATGGATTCACCTGCCTCCATAAAAATGGACTTCGAAGAGTTTTGTGCTGCTGCAATCAGTGTGTACCAGCTTGAGGTTCATGAAGAGTGGGACAGAATCTCAAAAACAGCATTCGAGCATTTCGAACAAGCAGGAAACGTAGTCATTTCAGTTGAGGGGTTGGCAAAGGAGATGAATGTGGGTGCTTCATCATGCTCTTTACCAGGCAACTGGATCCGAGAATCGGACGGAAAACTCAGCTTTGTTGGATACAAGAAGTTTTTGCACGACATCACTGTTCGCAGTGCAAACAAAAGACAGCGACAGAATGCTGCGTGA 1248 0.4279 MTTAVAIEDVRREVKMLKALSGHKNVVKFHDAFEDANNVYIVMELCDGGELLDRILSRGGRYTEEDAKTILFQALNVIAYCHLQGVVHRDLKPENFLFVSKDDDSQMKLIDFGLSDFVRPGERLSDVVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARSESGIFRSVLKANPNFDDSPWPSVSPEAKDFVKRLLNKDLRKRMTAAQALTHPWLKNENQAIPLDIFIYKQVKSYLHATPLRRAALKALSKALTEDELIYLRAQFSLLGPKNGRVSLDNFRAALMKNATGIMKEAPDILNLMDSPASIKMDFEEFCAAAISVYQLEVHEEWDRISKTAFEHFEQAGNVVISVEGLAKEMNVGASSCSLPGNWIRESDGKLSFVGYKKFLHDITVRSANKRQRQNAA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00099 415 SUPERFAMILY EF-hand 257 399 IPR011992 -
Pral2077g00099 415 Gene3D - 244 373 - -
Pral2077g00099 415 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00099 415 Gene3D - 263 329 - -
Pral2077g00099 415 CDD STKc_CAMK 6 223 - -
Pral2077g00099 415 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 366 - -
Pral2077g00099 415 Pfam Protein kinase domain 8 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00099 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Pral2077g00099 415 Gene3D Phosphorylase Kinase; domain 1 2 50 - -
Pral2077g00099 415 FunFam CDPK-related kinase 1 260 329 - -
Pral2077g00099 415 SUPERFAMILY Protein kinase-like (PK-like) 6 245 IPR011009 -
Pral2077g00099 415 Gene3D Transferase(Phosphotransferase) domain 1 51 243 - -
Pral2077g00099 415 SMART serkin_6 3 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00099 415 FunFam CDPK-related kinase 1 52 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00099 Pral-Chr2077 485248 488729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00099 1 411 EF-hand Containing Proteins AT2G46700 70.773 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral2077g00099 Pkinase 4.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00099 K13412 - gmx:100803631 660.988