Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00098 ATGGGCCATTGCTGCAGCAAAAATCTTTCCGCCGTCAACAATGAAACCTCCCACCCCGACCCTCACCAGAAACCTCCACATTCCGCTGCATCGCCCCGCTCTTCTGTCCATTCGGTCTCCGGAGCCACCGATGCTACCCCTGCCCGCCATAGTTACGCCAACTCCTACTCTACCAGTCCCTTTAACAGCCCCCTTCCGCCTGGAGTGCTGCCGTCTCCGGGTGGGACTCCCGGCAGGAAATTTCGATGGCCTCTGCCGCCTCCGTCGCCCGTGAAGCCGATCATGGCGGCAATGCTGAAACGGCAGGGGAAGGCTCGGCCTAAGGAGGGCTACATACCGGAGGAGCCAGAGGAAAGAACAGGGGGTGAGAGTCGGCTGGATAAGAGCTTTGGGTTTGCCAAGAATATTGACTCCAAGTATGAGCTGGGAAAAGAAATCGGTCGAGGACACTTTGGTCATACTCACCTGGCCAAAGCAAAAAAGGGAGCGCTCAAGGGGCAGTCTGTGGCTGTGAAAATAATATCCAAAGCTAAGATGACAACAGCCGTAGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAGGCCTTGTCTGGTCATAAAAATGTAGTCAAGTTTCATGATGCATTTGAGGATGCCAATAACGTCTACATAGTGATGGAATTGTGCGATGGAGGCGAACTACTTGACAGAATTCTCTCAAGAGGGGGAAGATACACAGAAGAAGATGCTAAAACTATTCTTTTTCAAGCTCTAAACGTAATAGCCTATTGTCATCTTCAAGGAGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTCTTTGTCTCAAAAGATGATGATTCTCAGATGAAGCTTATAGACTTCGGTCTATCTGATTTCGTGAGACCAGGTGAACGTCTGAGCGATGTTGTTGGCAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGATTTATGGAGTATTGGGGTTATAACATACATATTATTATGTGGAAGCAGACCATTCTGGGCACGCTCTGAATCAGGAATCTTTCGGTCTGTGCTAAAAGCTAATCCTAACTTCGATGATTCACCTTGGCCGTCTGTATCACCAGAGGCTAAAGACTTTGTAAAGAGACTCTTGAACAAGGATCTCAGGAAAAGGATGACCGCTGCCCAAGCATTAACTCACCCGTGGTTGAAAAATGAAAATCAAGCCATTCCATTAGACATTTTTATCTACAAGCAAGTCAAATCATATTTGCATGCCACGCCTCTAAGACGTGCAGCACTCAAGGCTCTCTCTAAAGCGTTGACAGAAGATGAGCTTATATACCTTAGAGCACAGTTTAGCCTCTTGGGACCAAAAAATGGTCGCGTTTCGCTTGACAATTTTCGAGCGGCTCTGATGAAAAATGCAACTGGTATCATGAAGGAAGCCCCGGACATTTTAAACTTGATGGATTCACCTGCCTCCATAAAAATGGACTTCGAAGAGTTTTGTGCTGCTGCAATCAGTGTGTACCAGCTTGAGGTTCATGAAGAGTGGGACAGAATCTCAAAAACAGCATTCGAGCATTTCGAACAAGCAGGAAACGTAGTCATTTCAGTTGAGGGGTTGGCAAAGGAGATGAATGTGGGTGCTTCATCATGCTCTTTACCAGGCAACTGGATCCGAGAATCGGACGGAAAACTCAGCTTTGTTGGATACAAGAAGTTTTTGCACGACATCACTGTTCGCAGTGCAAACAAAAGACAGCGACAGAATGCTGCGTGA 1782 0.4691 MGHCCSKNLSAVNNETSHPDPHQKPPHSAASPRSSVHSVSGATDATPARHSYANSYSTSPFNSPLPPGVLPSPGGTPGRKFRWPLPPPSPVKPIMAAMLKRQGKARPKEGYIPEEPEERTGGESRLDKSFGFAKNIDSKYELGKEIGRGHFGHTHLAKAKKGALKGQSVAVKIISKAKMTTAVAIEDVRREVKMLKALSGHKNVVKFHDAFEDANNVYIVMELCDGGELLDRILSRGGRYTEEDAKTILFQALNVIAYCHLQGVVHRDLKPENFLFVSKDDDSQMKLIDFGLSDFVRPGERLSDVVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARSESGIFRSVLKANPNFDDSPWPSVSPEAKDFVKRLLNKDLRKRMTAAQALTHPWLKNENQAIPLDIFIYKQVKSYLHATPLRRAALKALSKALTEDELIYLRAQFSLLGPKNGRVSLDNFRAALMKNATGIMKEAPDILNLMDSPASIKMDFEEFCAAAISVYQLEVHEEWDRISKTAFEHFEQAGNVVISVEGLAKEMNVGASSCSLPGNWIRESDGKLSFVGYKKFLHDITVRSANKRQRQNAA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00098 593 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00098 593 MobiDBLite consensus disorder prediction 103 125 - -
Pral2077g00098 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Pral2077g00098 593 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Pral2077g00098 593 Gene3D - 422 551 - -
Pral2077g00098 593 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00098 593 Gene3D Phosphorylase Kinase; domain 1 120 224 - -
Pral2077g00098 593 MobiDBLite consensus disorder prediction 1 89 - -
Pral2077g00098 593 SUPERFAMILY Protein kinase-like (PK-like) 138 425 IPR011009 -
Pral2077g00098 593 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00098 593 FunFam CDPK-related kinase 3 132 304 - -
Pral2077g00098 593 FunFam CDPK-related kinase 1 438 507 - -
Pral2077g00098 593 SUPERFAMILY EF-hand 435 577 IPR011992 -
Pral2077g00098 593 CDD STKc_CAMK 139 401 - -
Pral2077g00098 593 MobiDBLite consensus disorder prediction 28 63 - -
Pral2077g00098 593 FunFam CDPK-related kinase 1 133 228 - -
Pral2077g00098 593 Gene3D Transferase(Phosphotransferase) domain 1 225 421 - -
Pral2077g00098 593 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 544 - -
Pral2077g00098 593 Gene3D - 441 507 - -
Pral2077g00098 593 FunFam Calcium-dependent protein kinase SK5 312 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00098 Pral-Chr2077 485244 489419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00098 1 583 EF-hand Containing Proteins AT3G50530 55.134 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral2077g00098 Pkinase 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00098 K13412 - gmx:100803631 877.47