Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00097 ATGGGTGCGGATATGAAGATCGTCAACTTTCACGTCCACATGCCTCACCTCCTCCACTTTCATCACCACGACAAGAAGCACGCCAGACACACCCCAAAGGGATGCTTGGCCGTCCTGGTGGGACAAGGAGCCCAGCAGCAGAGATTTGTGATCCCTGTCATGTACTTCAATCACCCTCTCTTCATTCACTTGCTGCAGGAAGCCGAGCAAGAATATGGGTTCCATCAGAAGGGCCTCCTCACCATTCCCTGCCCCGTCGACGACTTTCGTACTGTTCAGGATCTGATTCATCAGGAGGAACAGCATCACCATCATGCCTGGTGCTTTAAAACTTGA 336 0.5208 MGADMKIVNFHVHMPHLLHFHHHDKKHARHTPKGCLAVLVGQGAQQQRFVIPVMYFNHPLFIHLLQEAEQEYGFHQKGLLTIPCPVDDFRTVQDLIHQEEQHHHHAWCFKT 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00097 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 91 IPR003676 GO:0009733
Pral2077g00097 111 Pfam Auxin responsive protein 24 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00097 Pral-Chr2077 483165 483500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00097 32 90 Calmodulin-binding Proteins AT5G20810 54.237 9.12e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00097 K14488 - gmx:100526867 135.576