Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00084 ATGGCGGGTTCGTCCGAGACGAAGTTCGTCCAAGATTTGTTCTTGTACGCGGCCAGTGCGGCGCTCAGTTGCTTGGTTTTGTTCGCTGGGCTTCGACACCTCGACCCCAATCGTGAGACATCAAAGAAAGCTCTTCAACACAAGAAAGACATAGCAAAGCGTCTTGGTCGTCCTCTCATTCAAACAAACGCTTACGAGGATGTCATAGCCTGTGATGTTATTAATCCCGACCACATTGATGTGAAGTTTGACTCTATCGGGGGACTGCAAACGATCAAGCAAGCTTTGTTTGAGCTTGTTATCCTGCCGCTTAAACGACCTGAACTGTTTTCTCATGGCAAACTTCTTGGCCCACAAAAGGGAGTCCTCTTGTATGGACTCCCTGGTACTGGGAAAACCATGCTTGCTAAAGCTATTGCAAAGGAGTCTGGATCAGCTTTCATTAATGTAAAGATATCGAACCTGATGAGCAAATGGTTTGGTGATGCTCAGAAACTTGTGGCTGCTGTATTTAGTCTGGCTTATAAGCTCCAGCCTGCTATCATATTCGTTGATGAAGTTGACAGCTTTTTGGGTCAGCGTAGTACAACAGATCATGAGGCAATGTCAAACATGAAAACTGAGTTCATGACTTTATGGGATGGATTTACCACCGATGTGAATGCTCGAATTATGGTCCTTGCAGCAACCAATCGTCCCTCAGAACTTGATGAGGCCATATTACGGCGTTTTCCTCAAGCCTTTGAAATTGGACTACCAGACCAAAAGGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGGTGAGAGAGTGGAACGCAACATTGACTTAGATCATATAGCTGCCTTGTGTGAGGGATATACTGGTTCAGATCTGTTTGACCTCTGTAAGAAGGCTGCCTATTTTCCGATTAGGGAGCTGCTGGATAAAGAAAAGCAAGGGAGAAATGCTCCTGAACCAAGGTGTTTGTCACAGTCGGATTTGGAGAAGGCTCTCACCACTTCACAGAAAACAAAGGTTGCTGCTGGTGAATACAGTGGATTAAATGTACAGTCACCAAGAAGGCCAGGACGCAGGGAGTCAGGTGATTATCAGTTTCAAGCTGCAATCAATGAACTCTCTAAGCTTGTGGTTTCTCAAATTATTAACCTCCAATCAGATGCACAGGATCCGTAA 1176 0.4507 MAGSSETKFVQDLFLYAASAALSCLVLFAGLRHLDPNRETSKKALQHKKDIAKRLGRPLIQTNAYEDVIACDVINPDHIDVKFDSIGGLQTIKQALFELVILPLKRPELFSHGKLLGPQKGVLLYGLPGTGKTMLAKAIAKESGSAFINVKISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFVDEVDSFLGQRSTTDHEAMSNMKTEFMTLWDGFTTDVNARIMVLAATNRPSELDEAILRRFPQAFEIGLPDQKERAEILKVILKGERVERNIDLDHIAALCEGYTGSDLFDLCKKAAYFPIRELLDKEKQGRNAPEPRCLSQSDLEKALTTSQKTKVAAGEYSGLNVQSPRRPGRRESGDYQFQAAINELSKLVVSQIINLQSDAQDP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00084 391 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 343 - -
Pral2077g00084 391 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Pral2077g00084 391 Gene3D - 253 333 - -
Pral2077g00084 391 Gene3D - 80 337 IPR027417 -
Pral2077g00084 391 Pfam AAA+ lid domain 274 309 IPR041569 -
Pral2077g00084 391 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Pral2077g00084 391 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Pral2077g00084 391 SMART AAA_5 118 254 IPR003593 GO:0016887
Pral2077g00084 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00084 Pral-Chr2077 434881 439440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00084 37 318 Calmodulin-binding Proteins AT3G56690 32.753 3.71e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00084 K22530 - gmx:100796908 657.521