Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00063 ATGGCACTGTCAAGCCCACACATCCAAAGATTACTCGTCACCAAACTCCATGGCCGTTCCACCTCCAGTAATGGCATCCGCAGAAACAGCGTCGCCAATACGAGCAGAGGCCGCTGCTGCTCCGCCATAGCCATCGATACTCCTTCGTCTTTTTCGGACGTGGCAGGCATCCGATGGGGATCCATTGCTTTGCAGGGTCTTCGCGAAGAGATGGAAGATGACATTGTTGTTCGTCCTGATGGCCTCCATGGCTTCTCTTTTGCAGCTGTGTTTGATGGCCATGGAGGATTTTCGTCTGTCGAGTTTCTCAGGGAAGAACTGTACAAGGAGTGTCTTGCAGCTTTACATGGTGGGTTAATATTGGATAGGGAAGATTTCCAGGCCATTAAAGCAGCATTAGAGGAGGCATTTGTCAATGCCGACACAAGTTTGTTAAAACGGCTTGAAATGAATGAAGATGAATCTGGCGCTACAGCAACTGCAATGTTCGTCAGAGATGATGTGCTTCTCATTTCGCATTTAGGTGACTCATCTGCGGTTCTAAGCCGGGCTGGTAGAGCGGAAGAGCTGACTAGTCCCCACCGACCATATGGGAGCAATAAATTCTCTCTTCAAGAAATTAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGGAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGATGTAAGATTCAAAACAAAGAAGAATGAAATGCTGAGAAAAGGGACCGAGGAAGGAAGATGGTCAGAAAAATTTGCTTCTCGTGTACAGCTCAACAGAGACCTAATCATTGCATGCCCTGATATTAATCAAGTACATCTTGGCTCGGATGCAGAATTTATAGTATTGGCATCTGATGGCTTATGGGACTACATGAAAAGGTCTAAGTTACATAAATGGTCATTTTCTTATAATGTCTCTTTAAGAGAGGAGAAATCACCTTCTCCTTCTTCCTACCATTTCAGCTCAGAAGCAGTTTCATTTGTGAGGAATCAACTTCGGGAACATGGTGATATTCAGCTTGCCTGCGAAGCTCTTGCACGAGCAGCTCTGGATCGACGCACACAGGATAACATTAGCATCATAATTGCTGATTTAGGGCGGACAGATTGGCGGAACTTGCCACTTCAGCAGCAAAACGTTATTTATGAGGCGGTCCAAGCTTTAGCCACCATTGGAATAGTGTCACTTGGAATTTGGTTTTCATCCCAGATTTTATGA 1239 0.4536 MALSSPHIQRLLVTKLHGRSTSSNGIRRNSVANTSRGRCCSAIAIDTPSSFSDVAGIRWGSIALQGLREEMEDDIVVRPDGLHGFSFAAVFDGHGGFSSVEFLREELYKECLAALHGGLILDREDFQAIKAALEEAFVNADTSLLKRLEMNEDESGATATAMFVRDDVLLISHLGDSSAVLSRAGRAEELTSPHRPYGSNKFSLQEIKRIREAGGWIVNGRICGDIAVSRAFGDVRFKTKKNEMLRKGTEEGRWSEKFASRVQLNRDLIIACPDINQVHLGSDAEFIVLASDGLWDYMKRSKLHKWSFSYNVSLREEKSPSPSSYHFSSEAVSFVRNQLREHGDIQLACEALARAALDRRTQDNISIIIADLGRTDWRNLPLQQQNVIYEAVQALATIGIVSLGIWFSSQIL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00063 412 SUPERFAMILY PP2C-like 51 373 IPR036457 -
Pral2077g00063 412 CDD PP2Cc 57 372 IPR001932 -
Pral2077g00063 412 PANTHER PROTEIN PHOSPHATASE 2C 46 370 IPR015655 GO:0004722|GO:0006470
Pral2077g00063 412 SMART PP2C_4 48 370 IPR001932 -
Pral2077g00063 412 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Pral2077g00063 412 ProSiteProfiles PPM-type phosphatase domain profile. 58 372 IPR001932 -
Pral2077g00063 412 Gene3D - 57 378 IPR036457 -
Pral2077g00063 412 Pfam Protein phosphatase 2C 60 301 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00063 Pral-Chr2077 346007 349578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00063 1 349 PP2C-type Phosphatase Gene Family AT4G27800 56.374 2.60e-136 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00063 K04457 - vra:106776113 581.252