Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00049 ATGGGGAAGAAAGGAGGCCGATGGTTCTCGTCAGTGAAGAGAGTTTTCAAATCGTCTTCTAATAAGGACTCGTCGGCGCCGGCGAGGAAGAAGGACAATGAAAGAAGACAGCCCGAAGTGGCAGAGGTTGTGTCTTTGGAGCATTTCCCTGCGGAGAGTTCTCATGATGATGTCATCACCAACGAGAATAGTATAGCATCCACGCCAGTGACTGAAGATAGAAACCATGCCATCGCCGTGGCGGCGGCCACAGCTGCGGCGGCAGAGGCTGCGGTTGCAGCGGCACAAGCAGCAGCCAGAGTTGTTCGATTGGCAGGTTATGGCCGCCACACTAAGGAAGAAAGAGCAGCAACTCTCATTCAATCATTCTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCCTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGGCATAATGTGCGGAAGCAAGCACAAATGACAATGCGCTGTATGCAAGCATTGGTTCGAGTACAGGCAAGAGTAAGAGCTCGGAGATTCCAGTTGAGCCAGGAGCGACTTCAGAAGACAGAGGAGGAGGAGGGGGAGGAGTACGAGGAGAGAGAATTCGAGGGTCAAGTTCCAAAGCCTATGAGCCCCATGAAAAGGATTGACCTGAATAGGTGGGACAATGGGCATCATGGCAGCCAGAAAATCCAGGAAAATGATGCCCGCAGACACGAAGCAGTAATGAAGAGGGAGAGAGCTCTGGCTTACGCTCTGAACCCTCAGCAACAGCAGAAGCCATTTCTGCCCTCGGACCCCAATGACAATGATGTCGGAACCATCCGGTACAACAACGAGCGTGAAAAGGCCCCGTGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACAGCCGTACAATGTCAGGAACGTGGGGCAGCGTGAGACTTCGTACATGGCCCTTGCCACCACAACCACCACCACTACCGACGACATGTCTGAAAAGACGGTGGAGATGGACATGGTGGCACCTTTAGGCTCAAGCAACATCAGCGCTATGGGCCTGATGAACCAGGAGTTTCTGGATTCAAGCCCAATGTCCAACAGAAAACACCATCGACAATTCAGTTTAAATGCGCCCAGCTATATGGCTCCGACCCAGTCCGCGAAAGCCAAGGTGCGAGGCCAGGGGCCGATCAAGCCACGGGGCTCGCCTGGGCCCCAGTGGAACTCATCCACAAAGAAAGGGCCTGGTGTCGGATCGATGTGTGATTCTTCAAGCTCTGGCGGAGGAACGTCCGGTTACAAGTTCCCGAGGAGCCCCAGCCCCAAACTTAATGGGAGCCGCCCGCAGTCTAGGCGGATTGCAGGCAGCAGCCCGGATTATCCTGGGTTTGAGGACTGGGCACTTCCTCTCGGAGGCCATGGTTGGGCATGA 1413 0.5471 MGKKGGRWFSSVKRVFKSSSNKDSSAPARKKDNERRQPEVAEVVSLEHFPAESSHDDVITNENSIASTPVTEDRNHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHTKEERAATLIQSFYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRFQLSQERLQKTEEEEGEEYEEREFEGQVPKPMSPMKRIDLNRWDNGHHGSQKIQENDARRHEAVMKRERALAYALNPQQQQKPFLPSDPNDNDVGTIRYNNEREKAPWGWNWLERWMSSQPYNVRNVGQRETSYMALATTTTTTTDDMSEKTVEMDMVAPLGSSNISAMGLMNQEFLDSSPMSNRKHHRQFSLNAPSYMAPTQSAKAKVRGQGPIKPRGSPGPQWNSSTKKGPGVGSMCDSSSSGGGTSGYKFPRSPSPKLNGSRPQSRRIAGSSPDYPGFEDWALPLGGHGWA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00049 470 PANTHER IQ-DOMAIN 5-RELATED 1 409 - -
Pral2077g00049 470 MobiDBLite consensus disorder prediction 371 470 - -
Pral2077g00049 470 SMART iq_5 112 134 IPR000048 GO:0005515
Pral2077g00049 470 SMART iq_5 135 156 IPR000048 GO:0005515
Pral2077g00049 470 MobiDBLite consensus disorder prediction 397 427 - -
Pral2077g00049 470 Pfam Protein of unknown function (DUF4005) 356 395 IPR025064 -
Pral2077g00049 470 Gene3D - 111 162 - -
Pral2077g00049 470 MobiDBLite consensus disorder prediction 24 39 - -
Pral2077g00049 470 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Pral2077g00049 470 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Pral2077g00049 470 MobiDBLite consensus disorder prediction 185 210 - -
Pral2077g00049 470 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Pral2077g00049 470 MobiDBLite consensus disorder prediction 1 39 - -
Pral2077g00049 470 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00049 Pral-Chr2077 303306 306670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00049 1 436 IQD Protein Family AT3G49260 50.108 1.23e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00049 - - gmx:100798026 532.332