Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00030 ATGTATGCGGACACTGGTCTTTTGTTCCCATATTTCCAGAATTTGTCTCAGGAGCTTCAACAACTCGATGAGTACTGTAAAACCCATAAGCCCAATGCGTCAATGAGTGACCTTGCTCAGTCTTCTGCCATGTCGGAGTATTTTGATTTGGCAGCAGAAGGAGACCTGTTCAAAGCTCCTGAACCTATTATTGAAGAACCAGTCGTAGACTTGGATCCCATGACCGCAGCCATTTCAATGATATCTTGTGGGGAAGATGCTGTTCCCTCACAGGGACTAAAAGCCTCCGATTCTCTTCAACATGAGCAACTCCTGAGCGAGGTTTTCTATGAATGCAAAAAAGATATGCTAGAAAAGGAATCAATTGAGTCACCCCTATCTGAGATTCTGGAAATCAAGGTTCCTGCTCTGAATACAGATGAAAACCAAATTCAAGAAAGTCCTGGCTTGCCATTACCAAAAAGTGTGAGTTCAGGATGTTTGAGCTCAATGGACTGGATGCAAGGGACTGCAATCAAGCCTGCTTTTCTTGATTTCCCAGGAATGAATTTCTGTGCAGATTATGGCATGCGAAGGGCATTTAGTGAAGGAGATATAAAGACTCTTGGTAGTGGTAATACGCACGTTATCCAATCTCCGTCAGAGAGGGCCCTTCCCATCAGTAACTGTACCAGTGAGGAACGCCGAGAAAAGCTCTCTAGATACAGGAGTAAGAAGACAAGGAGAAATTTTGGTCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAATAA 816 0.4412 MYADTGLLFPYFQNLSQELQQLDEYCKTHKPNASMSDLAQSSAMSEYFDLAAEGDLFKAPEPIIEEPVVDLDPMTAAISMISCGEDAVPSQGLKASDSLQHEQLLSEVFYECKKDMLEKESIESPLSEILEIKVPALNTDENQIQESPGLPLPKSVSSGCLSSMDWMQGTAIKPAFLDFPGMNFCADYGMRRAFSEGDIKTLGSGNTHVIQSPSERALPISNCTSEERREKLSRYRSKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00030 271 Pfam CCT motif 228 270 IPR010402 GO:0005515
Pral2077g00030 271 ProSiteProfiles CCT domain profile. 228 270 IPR010402 GO:0005515
Pral2077g00030 271 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 141 270 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00030 Pral-Chr2077 188770 192492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00030 214 269 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 1.33e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral2077g00030 CCT 5.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00030 - - pcin:129294779 413.69