LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2077g00017	ATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAACTAGCAGAAAAGAAATTTTCAGAAAGGGAATATGCTGGTGCAAAAAAGCTTGCCCTCAAGGCTCTAAATCTTTGTCCTACATTGGATGGTATTTCTCAGTTTTTAACTACTCTTGATGTTTACATCTCTTCCGAAACTAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTAAAGTGAACCCCTGCGCTGATGATGAGACAGTAAGAAAACATTACAGAAAGCTGGCTCTTACTCTTCACCCTGACGTTAACAAGTCTTTAGGCGCAGAAGGTGCTTTTAAGCTGGTTTCGGAGGCGTGGAGTATGTTATCAGAAAAGGACAAGAGACAGGCATATAACCAGGATATGAGTTTGAAAGGATTTCAACATAATGCTTCCAACCATGTCAGATCTCAGTCAGAAGGACCATGTTCAAATGGTTTTAATAATTTCAACAAGAATGTGACTACAAATGTGAGGAATGGAAATAATAAATGTCGTTTACAACCCACCTCAGTTCCCCCACCGAAAAAGTCTAGTACCTTCTGGACAATCTGTAAACAGTGCAAGACGCATTATGAATATCTCAAGATCTATTTGAATCATACCCTTATTTGTCCCACCTGTAACGAGCATTTCTTGGCTGTAGATATGCCTCCGCCTCCCAATATTTTCAAGTCCGCAAATCGGTCAAGCCAACAGCGTCAGAATTCTCAACATGATGCTGCAGTGAATAATCCAGGAAGCAATTGTACAGTTTCTCAATATGCAGGAGCCGGCGATTCCTCTGGCAGACTGTTTAAGAGGGCAAGCTCTCAGTGGGGTCCTCAGTCCAAAACGGCTGGTTTCGGCAGCAGAGATAGCTCATCATCTGTTGCTGCTCAAGCAGCAAATGTTGTGCAGAAGGCAAGTGAGAAAGTGGCAAAAGACTCTGAGAGAACACCATCAATTACTGAATGGGAGAGGAGTCAAATGTTGAAGAGGGCTGAAGGTTCCTTTAATAAGGTAGAAAAGACATCGAAGAAGAGGAGGACAGATGAGATTCGCATTAATGGTGATCTAGGATACATGAGTAATCATTTGGCCATGGGACATGGGGCTGCAGGATTTGGTCATGTTTCTGAATCAAGAAAGGTTAGCTGGCAAACAGAAAGGACCTCTGGCTTTTCTGGTATCACCAGCAAGCCCCATAGCATGAGAGAATTAGGAATGTTTGAAATACGGAACATGTTGATGCAGAAGGCCCGAAGCGACCTTCGTAAGAAGGTTCAAGAATGGAGATCAACAGCTGAAGCTAAAAATACCAAGAAGCACAAACAGAACAAGAGAACCAAAGCCACATTGAATGACAAAACACCTGATTTGGAGAATCATGGTGAGTCCGCTTTTAATGGTAGCCGGTATCTGGACAGCGACTCAATTAAGGTAGACCAAACCTGTATAACGATCAATGTTCCGGATTCAGACTTTCGCAATTTTGACTTGGATAGAACCGAAAATTCTTTCGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGGATGCCTCGGTATTATGCTCGAATCTACAAAGTGGTGTCCTTGAAGCCATTTAAGATGCGGATCAGTTGGCTTAACTCTCGAAGCAATAGTGAACTGGGTCCAATAGATTGGATAGGTTCTGGTTTTTGCAAAACCTGTGGGGATTTCAGAACTGGCAAGCATGAAATAACCGAATCATTAAATTCTTTTTCACACAAGGTTAAGTGGTCAAAAGGCCTCAGAGGAGTTGTTCGCATTTTTCCTGGAAAGGGGGAGGTTTGGGCTCTTTACAGAAACTGGTCTCCAGATTGGAGCCAACGTACTCCAGATGAAGTGATACACAAGTATGACATGGTAGAGGTGGTTGAAGATTTTGACGAAGACCAAGGTGTAGTGGTTTTCCCGCTTATTAAGGTTGCCGGATTTAGGAGCTTGTTTGATAGGCACAGAGACCCTCATGGGTTAAGGCGGATTCCTAAAGATGAGTTGTTTCGTTTCTCTCATCAGGTTCCTTATTACTTGCTTACAGGACAAGAAGCTCATAATGCCCCAAAAGGTTGTCGGGAGTTGGATCCGGCAGCCACTCCGGTCGACCTCCTGCAGAATACAACAGTAGCAAATGAGGCATCTGATGATGTTGGAAAACGTAGGGAAGACACATTGCTCAGTTCAACCGAAAAGCGTGGGTTTGAGATGCAGGAGAATGACACCCCAAAAACAAGTACAGGAGAAATGGTAGATGGAGATGGCGAAGCAGAGAAGCCATGTTAG	2319	0.4355	MECNKDEAVRAKELAEKKFSEREYAGAKKLALKALNLCPTLDGISQFLTTLDVYISSETKVSGEMDWYGILKVNPCADDETVRKHYRKLALTLHPDVNKSLGAEGAFKLVSEAWSMLSEKDKRQAYNQDMSLKGFQHNASNHVRSQSEGPCSNGFNNFNKNVTTNVRNGNNKCRLQPTSVPPPKKSSTFWTICKQCKTHYEYLKIYLNHTLICPTCNEHFLAVDMPPPPNIFKSANRSSQQRQNSQHDAAVNNPGSNCTVSQYAGAGDSSGRLFKRASSQWGPQSKTAGFGSRDSSSSVAAQAANVVQKASEKVAKDSERTPSITEWERSQMLKRAEGSFNKVEKTSKKRRTDEIRINGDLGYMSNHLAMGHGAAGFGHVSESRKVSWQTERTSGFSGITSKPHSMRELGMFEIRNMLMQKARSDLRKKVQEWRSTAEAKNTKKHKQNKRTKATLNDKTPDLENHGESAFNGSRYLDSDSIKVDQTCITINVPDSDFRNFDLDRTENSFEEDQVWAAYDDDDGMPRYYARIYKVVSLKPFKMRISWLNSRSNSELGPIDWIGSGFCKTCGDFRTGKHEITESLNSFSHKVKWSKGLRGVVRIFPGKGEVWALYRNWSPDWSQRTPDEVIHKYDMVEVVEDFDEDQGVVVFPLIKVAGFRSLFDRHRDPHGLRRIPKDELFRFSHQVPYYLLTGQEAHNAPKGCRELDPAATPVDLLQNTTVANEASDDVGKRREDTLLSSTEKRGFEMQENDTPKTSTGEMVDGDGEAEKPC	772

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2077g00017	772	Pfam	Domain of unknown function (DUF3444)	489	695	IPR024593	-
	Pral2077g00017	772	Pfam	DnaJ domain	66	127	IPR001623	-
	Pral2077g00017	772	PANTHER	BNAC03G44070D PROTEIN	1	712	-	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	232	262	-	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	726	750	-	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	723	772	-	-
	Pral2077g00017	772	CDD	DnaJ	66	118	IPR001623	-
	Pral2077g00017	772	ProSiteProfiles	dnaJ domain profile.	66	130	IPR001623	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	277	296	-	-
	Pral2077g00017	772	SMART	dnaj_3	65	122	IPR001623	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	312	330	-	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	309	330	-	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	231	262	-	-
	Pral2077g00017	772	SUPERFAMILY	Chaperone J-domain	58	126	IPR036869	-
	Pral2077g00017	772	PRINTS	DnaJ domain signature	102	122	IPR001623	-
	Pral2077g00017	772	PRINTS	DnaJ domain signature	68	86	IPR001623	-
	Pral2077g00017	772	PRINTS	DnaJ domain signature	86	101	IPR001623	-
	Pral2077g00017	772	Gene3D	DnaJ domain	63	173	IPR036869	-
	Pral2077g00017	772	MobiDBLite	consensus disorder prediction	434	470	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2077g00017	Pral-Chr2077	108546	112188	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2077g00017	4	232	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	29.362	2.07e-27	112

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2077g00017	-		-	cam:101501612	955.666