Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00013 ATGGATTGGTATGGTATACTTAAAGTGAACCCCTGCGCTGATGATGAGACAGTAAGAAAACATTACAGAAAGCTGGCTCTTACTCTTCACCCTGACGTTAACAAGTCTTTAGGCGCAGAAGGTGCTTTTAAGCTGGTTTCGGAGGCGTGGAGTATGTTATCAGAAAAGGACAAGAGACAGGCATATAACCAGGATATGAGTTTGAAAGGATTTCAACATAATGCTTCCAACCATGTCAGATCTCAGTCAGAAGGACCATGTTCAAATGGTTTTAATAATTTCAACAAGAATGTGACTACAAATGTGAGGAATGGAAATAATAAATGTCGTTTACAACCCACCTCAGTTCCCCCACCGAAAAAGTCTAGTACCTTCTGGACAATCTGTAAACAGTGCAAGACGCATTATGAATATCTCAAGATCTATTTGAATCATACCCTTATTTGTCCCACCTGTAACGAGCATTTCTTGGCTGTAGATATGCCTCCGCCTCCCAATATTTTCAAGTCCGCAAATCGGTCAAGCCAACAGCGTCAGAATTCTCAACATGATGCTGCAGTGAATAATCCAGGAAGCAATTGTACAGTTTCTCAATATGCAGGAGCCGGCGATTCCTCTGGCAGACTGTTTAAGAGGGCAAGCTCTCAGTGGGGTCCTCAGTCCAAAACGGCTGGTTTCGGCAGCAGAGATAGCTCATCATCTGTTGCTGCTCAAGCAGCAAATGTTGTGCAGAAGGCAAGTGAGAAAGTGGCAAAAGACTCTGAGAGAACACCATCAATTACTGAATGGGAGAGGAGTCAAATGTTGAAGAGGGCTGAAGGTTCCTTTAATAAGGTAGAAAAGACATCGAAGAAGAGGAGGACAGATGAGATTCGCATTAATGGTGATCTAGGATACATGAGTAATCATTTGGCCATGGGACATGGGGCTGCAGGATTTGGTCATGTTTCTGAATCAAGAAAGGTTAGCTGGCAAACAGAAAGGACCTCTGGCTTTTCTGGTATCACCAGCAAGCCCCATAGCATGAGAGAATTAGGAATGTTTGAAATACGGAACATGTTGATGCAGAAGGCCCGAAGCGACCTTCGTAAGAAGGTTCAAGAATGGAGATCAACAGCTGAAGCTAAAAATACCAAGAAGCACAAACAGAACAAGAGAACCAAAGCCACATTGAATGACAAAACACCTGATTTGGAGAATCATGGTGAGTCCGCTTTTAATGGTAGCCGGTATCTGGACAGCGACTCAATTAAGGTAGACCAAACCTGTATAACGATCAATGTTCCGGATTCAGACTTTCGCAATTTTGACTTGGATAGAACCGAAAATTCTTTCGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGGATGCCTCGGTATTATGCTCGAATCTACAAAGTGGTGTCCTTGAAGCCATTTAAGATGCGGATCAGTTGGCTTAACTCTCGAAGCAATAGTGAACTGGGTCCAATAGATTGGATAGGTTCTGGTTTTTGCAAAACCTGTGGGGATTTCAGAACTGGCAAGCATGAAATAACCGAATCATTAAATTCTTTTTCACACAAGGTTAAGTGGTCAAAAGGCCTCAGAGGAGTTGTTCGCATTTTTCCTGGAAAGGGGGAGGTTTGGGCTCTTTACAGAAACTGGTCTCCAGATTGGAGCCAACGTACTCCAGATGAAGTGATACACAAGTATGACATGGTAGAGGTGGTTGAAGATTTTGACGAAGACCAAGGTGTAGTGGTTTTCCCGCTTATTAAGGTTGCCGGATTTAGGAGCTTGTTTGATAGGCACAGAGACCCTCATGGGTTAAGGCGGATTCCTAAAGATGAGTTGTTTCGTTTCTCTCATCAGGTTCCTTATTACTTGCTTACAGGACAAGAAGCTCATAATGCCCCAAAAGGTTGTCGGGAGTTGGATCCGGCAGCCACTCCGGTCGACCTCCTGCAGAATACAACAGTAGCAAATGAGGCATCTGATGATGTTGGAAAACGTAGGGAAGACACATTGCTCAGTTCAACCGAAAAGCGTGGGTTTGAGATGCAGGAGAATGACACCCCAAAAACAAGTACAGGAGAAATGGTAGATGGAGATGGCGAAGCAGAGAAGCCATGTTAG 2127 0.4401 MDWYGILKVNPCADDETVRKHYRKLALTLHPDVNKSLGAEGAFKLVSEAWSMLSEKDKRQAYNQDMSLKGFQHNASNHVRSQSEGPCSNGFNNFNKNVTTNVRNGNNKCRLQPTSVPPPKKSSTFWTICKQCKTHYEYLKIYLNHTLICPTCNEHFLAVDMPPPPNIFKSANRSSQQRQNSQHDAAVNNPGSNCTVSQYAGAGDSSGRLFKRASSQWGPQSKTAGFGSRDSSSSVAAQAANVVQKASEKVAKDSERTPSITEWERSQMLKRAEGSFNKVEKTSKKRRTDEIRINGDLGYMSNHLAMGHGAAGFGHVSESRKVSWQTERTSGFSGITSKPHSMRELGMFEIRNMLMQKARSDLRKKVQEWRSTAEAKNTKKHKQNKRTKATLNDKTPDLENHGESAFNGSRYLDSDSIKVDQTCITINVPDSDFRNFDLDRTENSFEEDQVWAAYDDDDGMPRYYARIYKVVSLKPFKMRISWLNSRSNSELGPIDWIGSGFCKTCGDFRTGKHEITESLNSFSHKVKWSKGLRGVVRIFPGKGEVWALYRNWSPDWSQRTPDEVIHKYDMVEVVEDFDEDQGVVVFPLIKVAGFRSLFDRHRDPHGLRRIPKDELFRFSHQVPYYLLTGQEAHNAPKGCRELDPAATPVDLLQNTTVANEASDDVGKRREDTLLSSTEKRGFEMQENDTPKTSTGEMVDGDGEAEKPC 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00013 708 Pfam DnaJ domain 2 63 IPR001623 -
Pral2077g00013 708 PANTHER BNAC03G44070D PROTEIN 1 648 - -
Pral2077g00013 708 MobiDBLite consensus disorder prediction 168 198 - -
Pral2077g00013 708 ProSiteProfiles dnaJ domain profile. 2 66 IPR001623 -
Pral2077g00013 708 CDD DnaJ 2 54 IPR001623 -
Pral2077g00013 708 MobiDBLite consensus disorder prediction 213 232 - -
Pral2077g00013 708 PRINTS DnaJ domain signature 38 58 IPR001623 -
Pral2077g00013 708 PRINTS DnaJ domain signature 4 22 IPR001623 -
Pral2077g00013 708 PRINTS DnaJ domain signature 22 37 IPR001623 -
Pral2077g00013 708 SMART dnaj_3 1 58 IPR001623 -
Pral2077g00013 708 SUPERFAMILY Chaperone J-domain 1 78 IPR036869 -
Pral2077g00013 708 MobiDBLite consensus disorder prediction 659 708 - -
Pral2077g00013 708 Pfam Domain of unknown function (DUF3444) 425 631 IPR024593 -
Pral2077g00013 708 MobiDBLite consensus disorder prediction 370 406 - -
Pral2077g00013 708 MobiDBLite consensus disorder prediction 662 686 - -
Pral2077g00013 708 Gene3D DnaJ domain 1 109 IPR036869 -
Pral2077g00013 708 MobiDBLite consensus disorder prediction 167 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00013 Pral-Chr2077 108546 117251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00013 2 165 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 32.203 1.31e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00013 - - cam:101501612 859.751