Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00010 ATGGAAGATTCGGGCGCACATGACCTCATCAACGAGCTGCTCCAGGGGAGGGACCTCGCAAGGCAGCTTCAGATGTGTGTGAACGCTCCCTCCGCCTCCCCACAAACCCCTGACATGTTGATCCGTGGCATCATCGCCGCATTTGACAACGCCCTCGCCCTGCTCAACAGCCCCGCCGCCAAACACCCAACTGACTCACCGCCTTTCAGTCCTCTTGCCCAACACTCCCACAAGCATATCCAGCTCCATGAACAAAACTCCTTGGCAAGATGGACCAAGCAGATTAGAATTAGCCCCGGGATGGCCGTCGAGTCCCTTCTCGACGATGGGTTTAGCTGGAGGAAATATGGCCAGAAAGACATTCTTGGAGCCAAATTCCCGAGAGGATACTATAGATGCACCCATAGACATACGCAGGGGTGCTTGGCCACAAAGCAAGTGCAACGATCCGACGAAGACCCGGCAATCATGGAAGTTAATTACAGGGGAAACCACACCTGCAAGCTCGCCCCCAGCACCGCTCCTCCGTCGCAAGAACAGCTCGTGAACCTACGTGCAGGCCTGAGGGTGCTGACGGAGAACTTAAATGCTTCTGACCAGACCTCTTTTGCTTCATTCCTGTTGCCTTCGACTTCCAACGTGAAACCCGACAGCCCAGACTCCACGTGTCCTGCCGTCGAAAACAACGTTGAAACCTTTAGTTCTTCTCCATACATGTCCCCCGCCTCCCCTGCCGCAGCCAACTATTCGGTGTCCCAAGGAGTGGTCAATACCTCAGCAGGACCCCTTAATTTGCCTGCTTCAACCTCTGACATTAACAACGTCGTCTCTCCGGCAAGCGCCCCCGCCGTCGCTTCCGAGTTCCCATTTGACCGCTTCGAAATTGAAGGCCGCAACTTCACATTTCCGAACCCAGGATACTTTTAG 927 0.548 MEDSGAHDLINELLQGRDLARQLQMCVNAPSASPQTPDMLIRGIIAAFDNALALLNSPAAKHPTDSPPFSPLAQHSHKHIQLHEQNSLARWTKQIRISPGMAVESLLDDGFSWRKYGQKDILGAKFPRGYYRCTHRHTQGCLATKQVQRSDEDPAIMEVNYRGNHTCKLAPSTAPPSQEQLVNLRAGLRVLTENLNASDQTSFASFLLPSTSNVKPDSPDSTCPAVENNVETFSSSPYMSPASPAAANYSVSQGVVNTSAGPLNLPASTSDINNVVSPASAPAVASEFPFDRFEIEGRNFTFPNPGYF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00010 308 FunFam WRKY transcription factor 53 93 170 - -
Pral2077g00010 308 SMART WRKY_cls 107 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2077g00010 308 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 42 247 IPR044810 GO:0003700
Pral2077g00010 308 Gene3D WRKY domain 99 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2077g00010 308 Pfam WRKY DNA -binding domain 108 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2077g00010 308 SUPERFAMILY WRKY DNA-binding domain 105 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2077g00010 308 ProSiteProfiles WRKY domain profile. 102 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00010 Pral-Chr2077 72706 74184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00010 10 174 WRKY Transcription Factor Family AT5G24110 44.643 3.64e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2077g00010 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00010 - - pcin:129294785 398.282