Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00002 ATGTCGCAATCTCAGACAATAAGACCAAGGTATCAAGTAACAAACATACTGTACGCTCAAAGAAGCCTCACGAGTCATGTTCAATTATCTCTGATTCAACTCTACATTTTCATCGAATACTATCGCTTAATCTTCAGACCTTCTGCTTTTTCACCAGCTTATTACTGTAGAATCAATCAATACCTCCGGGAGATTATGGGAAACAGACTGGAATTGTTGTTCGTGTTCTCAACAGCCTTCACGGTTGGAGCAATGTTCCTTCGTGTTGGAGCCGAGCCAGTGGAAGATAAACAAGCCTTGCTTGACTTCCTGCACAATATAAACCACTCTCATGCTCTAAACTGGGAAGAGAAATCTTCAGCATGCCATAGCTGGAAGGGAGTCACCTGCGATAGAGAACATTCCAGAGTCATAGCCCTTCATTTACCTGCAGTTGGATTGAGCGGTCCAATACCACCGAAGACCCTAAGTCGCCTCTCAGCACTTCAGACTCTGAATCTAAAATCCAATAGCATAACGGGTCCTTTTCCTTCTGGTTTCTCTGAGCTTAAGAATTTAACCTATCTTGACATTCAATTCAACGAGTTTTCTGGCCTATTACCGCCAGATTTCTCAGTTTGGAAGTATTTGACTGTTGCTGATTTTTCCAACAACTTTTTTAATGGGAGCATTCCTTCATCAATTTCGAATCTGATTCATCTCACATCTTTAGTCCTGGCAAACAACTCGCTTTCGGGTGAAATTCCTAATATCAATATTCCTACCCTGCAAGAACTGAATCTGGCCAACAATAAGCTTAGTGGGACGGTGCCCAACTCCCTTCAGAGATTCCCAAGTTGGGCGTTCTCAGGGAACAATCTTTCATCGGCAAATGCTCAACCAAGAAAGAAAACGTCAAAAAAACTTGGTAAGTCGGCTTTAATAGGTATAATTCTGGGTTGCAGTGGGCTGGCGTTTGGAGTTATTGCAGCTTGCTTGCTTTTGTGCTACTATGATAAAAGAGGTGAAAATGGGCTAGCAATGAAATCTCAGAAAAAAGTCACGTTTCTCAAAAAGGATATCTCCGAGAGTCATTGCAGAAAAAACAAGATTGAGTTCTTTGAGGATTGCAATTTCGCGTTTGACCTGGAGGATCTGTTGAGAGCATCTGCTGAGGTGCTCGGCAAGGGGACCTATGGCACAACATATAAGGCAAATCTAGAGGACGCTACCACTGTGGCGGTGAAGAGACTGAAAGAGGTCATCATCGGAAAACGCGAGTTTGAACAGCAGATGGAGGTTGTGGGAAGGATTAGGCACGACAATGTGGCAGCTCTAAGGGCATATTACTATTCCAAGGAGGAGAAACTTATGATCTATGATTACTATGAACACAGTAGCGTTTCTGCTATGTTGCACGGTAGAAGAGGGGAAGAAAGGATTTCTTTGGATTGGCATGGCAGACTGAGGATCGCAGTGGGTGCAGCAAGAGGAATAGCTCACGTCCATGCTCAACAAGGAGGAAAACTTGTCCATGGAAATATAAAAGCCTCGAACATCTTCCTCAACTCCGAAGGATACGGCTGTATTTCTGACATTGGTTTAGCAACACTGATGAGTCCAATAGTGCCACCGTCTCTAAGAAGTGCTGGCTACCGTGCTCCGGAAGTAACAGACCCCAGAAAAGCAAGCCACGCATCTGACGTCTACAGTTTTGGGGTGTTTCTGTTGGAGCTTTTGACTGGAAAAGGCCCCATGCACACCACAGGAAGTGAGGAGGCCGTCCACCTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCAGAAGTGTTTGATGTCCAATTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTTCAAATGTTACAACTTGCGATGGCATGTGTTGTTAGAGTTCCAGAGCAGAGACCAACAATGCCAGATGTTTTAAGAACGATGGAGGAAATTGGTCGACCAAATGCCGAGAATCGGCTATCTTCTGAATCCAGATCAGCAGCTTCCACCCCGACTCCACCAGCAATTGACATGCCTTCTTCCTCTGTGGATGCTTAG 2061 0.4459 MSQSQTIRPRYQVTNILYAQRSLTSHVQLSLIQLYIFIEYYRLIFRPSAFSPAYYCRINQYLREIMGNRLELLFVFSTAFTVGAMFLRVGAEPVEDKQALLDFLHNINHSHALNWEEKSSACHSWKGVTCDREHSRVIALHLPAVGLSGPIPPKTLSRLSALQTLNLKSNSITGPFPSGFSELKNLTYLDIQFNEFSGLLPPDFSVWKYLTVADFSNNFFNGSIPSSISNLIHLTSLVLANNSLSGEIPNINIPTLQELNLANNKLSGTVPNSLQRFPSWAFSGNNLSSANAQPRKKTSKKLGKSALIGIILGCSGLAFGVIAACLLLCYYDKRGENGLAMKSQKKVTFLKKDISESHCRKNKIEFFEDCNFAFDLEDLLRASAEVLGKGTYGTTYKANLEDATTVAVKRLKEVIIGKREFEQQMEVVGRIRHDNVAALRAYYYSKEEKLMIYDYYEHSSVSAMLHGRRGEERISLDWHGRLRIAVGAARGIAHVHAQQGGKLVHGNIKASNIFLNSEGYGCISDIGLATLMSPIVPPSLRSAGYRAPEVTDPRKASHASDVYSFGVFLLELLTGKGPMHTTGSEEAVHLVRWVNSVVREEWTAEVFDVQLLRFPNIEEEMVQMLQLAMACVVRVPEQRPTMPDVLRTMEEIGRPNAENRLSSESRSAASTPTPPAIDMPSSSVDA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00002 686 Pfam Protein kinase domain 384 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00002 686 ProSiteProfiles Protein kinase domain profile. 381 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00002 686 Pfam Leucine rich repeat 151 195 IPR001611 GO:0005515
Pral2077g00002 686 Gene3D Ribonuclease Inhibitor 94 302 IPR032675 -
Pral2077g00002 686 PANTHER OS05G0588300 PROTEIN 79 664 - -
Pral2077g00002 686 FunFam pollen receptor-like kinase 1 350 455 - -
Pral2077g00002 686 MobiDBLite consensus disorder prediction 650 686 - -
Pral2077g00002 686 SUPERFAMILY L domain-like 106 279 - -
Pral2077g00002 686 Gene3D Phosphorylase Kinase; domain 1 346 455 - -
Pral2077g00002 686 Pfam Leucine Rich Repeat 256 276 IPR001611 GO:0005515
Pral2077g00002 686 ProSitePatterns Protein kinases ATP-binding region signature. 387 418 IPR017441 GO:0005524
Pral2077g00002 686 Pfam Leucine rich repeat N-terminal domain 95 131 IPR013210 -
Pral2077g00002 686 MobiDBLite consensus disorder prediction 658 686 - -
Pral2077g00002 686 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 456 663 - -
Pral2077g00002 686 FunFam Probable inactive receptor kinase RLK902 93 252 - -
Pral2077g00002 686 Gene3D Transferase(Phosphotransferase) domain 1 457 671 - -
Pral2077g00002 686 SUPERFAMILY Protein kinase-like (PK-like) 385 649 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00002 Pral-Chr2077 7127 28426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00002 91 677 Receptor kinase-like Gene Family AT4G23740 53.571 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral2077g00002 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00002 - - aprc:113851984 876.315