Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2077g00001 ATGACTTATTACTGTAGAATCAATCAATACCTCCGGGAGATTATGGGAAACAGACTGGAATTGTTGTTCGTGTTCTCAACAGCCTTCACGGTTGGAGCAATGTTCCTTCGTGTTGGAGCCGAGCCAGTGGAAGATAAACAAGCCTTGCTTGACTTCCTGCACAATATAAACCACTCTCATGCTCTAAACTGGGAAGAGAAATCTTCAGCATGCCATAGCTGGAAGGGAGTCACCTGCGATAGAGAACATTCCAGAGTCATAGCCCTTCATTTACCTGCAGTTGGATTGAGCGGTCCAATACCACCGAAGACCCTAAGTCGCCTCTCAGCACTTCAGACTCTGAATCTAAAATCCAATAGCATAACGGGTCCTTTTCCTTCTGGTTTCTCTGAGCTTAAGAATTTAACCTATCTTGACATTCAATTCAACGAGTTTTCTGGCCTATTACCGCCAGATTTCTCAGTTTGGAAGTATTTGACTGTTGCTGATTTTTCCAACAACTTTTTTAATGGGAGCATTCCTTCATCAATTTCGAATCTGATTCATCTCACATCTTTAGTCCTGGCAAACAACTCGCTTTCGGGTGAAATTCCTAATATCAATATTCCTACCCTGCAAGAACTGAATCTGGCCAACAATAAGCTTAGTGGGACGGTGCCCAACTCCCTTCAGAGATTCCCAAGTTGGGCGTTCTCAGGGAACAATCTTTCATCGGCAAATGCTCAACCAAGAAAGAAAACGTCAAAAAAACTTGGTAAGTCGGCTTTAATAGGTATAATTCTGGGTTGCAGTGGGCTGGCGTTTGGAGTTATTGCAGCTTGCTTGCTTTTGTGCTACTATGATAAAAGAGGTGAAAATGGGCTAGCAATGAAATCTCAGAAAAAAGTCACGTTTCTCAAAAAGGATATCTCCGAGAGTCATTGCAGAAAAAACAAGATTGAGTTCTTTGAGGATTGCAATTTCGCGTTTGACCTGGAGGATCTGTTGAGAGCATCTGCTGAGGTGCTCGGCAAGGGGACCTATGGCACAACATATAAGGCAAATCTAGAGGACGCTACCACTGTGGCGGTGAAGAGACTGAAAGAGGTCATCATCGGAAAACGCGAGTTTGAACAGCAGATGGAGGTTGTGGGAAGGATTAGGCACGACAATGTGGCAGCTCTAAGGGCATATTACTATTCCAAGGAGGAGAAACTTATGATCTATGATTACTATGAACACAGTAGCGTTTCTGCTATGTTGCACGGTAGAAGAGGGGAAGAAAGGATTTCTTTGGATTGGCATGGCAGACTGAGGATCGCAGTGGGTGCAGCAAGAGGAATAGCTCACGTCCATGCTCAACAAGGAGGAAAACTTGTCCATGGAAATATAAAAGCCTCGAACATCTTCCTCAACTCCGAAGGATACGGCTGTATTTCTGACATTGGTTTAGCAACACTGATGAGTCCAATAGTGCCACCGTCTCTAAGAAGTGCTGGCTACCGTGCTCCGGAAGTAACAGACCCCAGAAAAGCAAGCCACGCATCTGACGTCTACAGTTTTGGGGTGTTTCTGTTGGAGCTTTTGACTGGAAAAGGCCCCATGCACACCACAGGAAGTGAGGAGGCCGTCCACCTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCAGAAGTGTTTGATGTCCAATTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTTCAAATGTTACAACTTGCGATGGCATGTGTTGTTAGAGTTCCAGAGCAGAGACCAACAATGCCAGATGTTTTAAGAACGATGGAGGAAATTGGTCGACCAAATGCCGAGAATCGGCTATCTTCTGAATCCAGATCAGCAGCTTCCACCCCGACTCCACCAGCAATTGACATGCCTTCTTCCTCTGTGGATGCTTAG 1908 0.4507 MTYYCRINQYLREIMGNRLELLFVFSTAFTVGAMFLRVGAEPVEDKQALLDFLHNINHSHALNWEEKSSACHSWKGVTCDREHSRVIALHLPAVGLSGPIPPKTLSRLSALQTLNLKSNSITGPFPSGFSELKNLTYLDIQFNEFSGLLPPDFSVWKYLTVADFSNNFFNGSIPSSISNLIHLTSLVLANNSLSGEIPNINIPTLQELNLANNKLSGTVPNSLQRFPSWAFSGNNLSSANAQPRKKTSKKLGKSALIGIILGCSGLAFGVIAACLLLCYYDKRGENGLAMKSQKKVTFLKKDISESHCRKNKIEFFEDCNFAFDLEDLLRASAEVLGKGTYGTTYKANLEDATTVAVKRLKEVIIGKREFEQQMEVVGRIRHDNVAALRAYYYSKEEKLMIYDYYEHSSVSAMLHGRRGEERISLDWHGRLRIAVGAARGIAHVHAQQGGKLVHGNIKASNIFLNSEGYGCISDIGLATLMSPIVPPSLRSAGYRAPEVTDPRKASHASDVYSFGVFLLELLTGKGPMHTTGSEEAVHLVRWVNSVVREEWTAEVFDVQLLRFPNIEEEMVQMLQLAMACVVRVPEQRPTMPDVLRTMEEIGRPNAENRLSSESRSAASTPTPPAIDMPSSSVDA 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2077g00001 635 Pfam Protein kinase domain 333 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00001 635 Gene3D Ribonuclease Inhibitor 43 251 IPR032675 -
Pral2077g00001 635 ProSiteProfiles Protein kinase domain profile. 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2077g00001 635 PANTHER OS05G0588300 PROTEIN 28 613 - -
Pral2077g00001 635 Pfam Leucine rich repeat 100 144 IPR001611 GO:0005515
Pral2077g00001 635 SUPERFAMILY Protein kinase-like (PK-like) 334 598 IPR011009 -
Pral2077g00001 635 FunFam pollen receptor-like kinase 1 299 404 - -
Pral2077g00001 635 MobiDBLite consensus disorder prediction 599 635 - -
Pral2077g00001 635 SUPERFAMILY L domain-like 55 228 - -
Pral2077g00001 635 Gene3D Transferase(Phosphotransferase) domain 1 406 620 - -
Pral2077g00001 635 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 405 612 - -
Pral2077g00001 635 Pfam Leucine Rich Repeat 205 225 IPR001611 GO:0005515
Pral2077g00001 635 Pfam Leucine rich repeat N-terminal domain 44 80 IPR013210 -
Pral2077g00001 635 MobiDBLite consensus disorder prediction 607 635 - -
Pral2077g00001 635 FunFam Probable inactive receptor kinase RLK902 42 201 - -
Pral2077g00001 635 ProSitePatterns Protein kinases ATP-binding region signature. 336 367 IPR017441 GO:0005524
Pral2077g00001 635 Gene3D Phosphorylase Kinase; domain 1 295 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2077g00001 Pral-Chr2077 6654 28426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2077g00001 40 626 Receptor kinase-like Gene Family AT4G23740 53.571 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral2077g00001 Pkinase 8.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2077g00001 - - aprc:113851984 876.315