Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2076g00003 ATGGGATGCTTTGGCTGCTGCGAAGACAGTGAAGTACATACACATGCTGACAACAAAACCTTCATGCAAAACAATTCTGCAGGGAGAACTGGCTATACTGGAAAAGAGGCTGTTGCAAGAACCACTCCACCTACTGTACATTTTCAACCTATTGCTGTCCCTTCCCTTTCAGTTGATGAATTAAAGTCCTTGACAGATAATTTTGGCACGAAATCTTTTATCGGGGAGGGTGCGTATGGCAAAGTATATCATGCCATATTGAGAAATGGCCGTGCTGTGGCTATAAAAAAGTTGGATTCTAGTAAGCAACCAGAGCAAGAGTTTCTTGCACAGGTCTCCACTGTCTCAAGGTTAAGGCATGAAAATGTTATTGAACTTGTTGGTTATTGTGTTGAGGGTTCTTTTCGTGCCCTAGCCTATGAGTATGCTCCTAAAGGATCACTTCATGACATCCTACATGGACGCAAAGGTGATAGGGGCGCACATCCTGGTCCAGTTCTATCTTGGGCACAGAGAGTTAAAATTGCTGTTGGAGTAGCTAAAGGATTAGAATATCTACATGAAAAAGCAGAAACTCGTATCGTCCATCGCCACATCAAGTCTAGCAATATACTGCTTTTTGATGATGATGTTTCAAAGATTGCTGATTTTGATTTGTCAAATCAATCCCCTGATGAAGTAGCTCGTGTCCATTCTACTCGTGTTCTTGGAACTTTTGGTTATCATGCTCCAGAATTTGCAATGACGGGAGATGTCACTGTAAAGAGTGACGTTTACAGTTTTGGAGTTATATTGTTGGAACTGTTAACCGGGCGCAAGCCTGTTGATCATACACTGCCACGAGGGCAACAAAGCCTAGTGACTTGGGCAACACCAAAACTGAGTGAAGATAAGGTAAAGCAGTGTGTGGATGCCAGATTACAGGATGATTACCCTCCCAAAGCAGTTGCCAAGATGGCTGCTGTTGCTGCATTGTGTCTGCAATATGAAGCCGGGTTAAGGCCAAACATGGGCATTGTTGTTAAAGCTTTACAACCACTGTCAAATCCTCGTCCTGTTCAGCCAAGAGAAAAGTATTGA 1080 0.4315 MGCFGCCEDSEVHTHADNKTFMQNNSAGRTGYTGKEAVARTTPPTVHFQPIAVPSLSVDELKSLTDNFGTKSFIGEGAYGKVYHAILRNGRAVAIKKLDSSKQPEQEFLAQVSTVSRLRHENVIELVGYCVEGSFRALAYEYAPKGSLHDILHGRKGDRGAHPGPVLSWAQRVKIAVGVAKGLEYLHEKAETRIVHRHIKSSNILLFDDDVSKIADFDLSNQSPDEVARVHSTRVLGTFGYHAPEFAMTGDVTVKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDARLQDDYPPKAVAKMAAVAALCLQYEAGLRPNMGIVVKALQPLSNPRPVQPREKY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2076g00003 359 Gene3D Phosphorylase Kinase; domain 1 31 142 - -
Pral2076g00003 359 Gene3D Transferase(Phosphotransferase) domain 1 144 355 - -
Pral2076g00003 359 FunFam pto-interacting protein 1 144 355 - -
Pral2076g00003 359 Pfam Protein tyrosine and serine/threonine kinase 72 343 IPR001245 GO:0004672|GO:0006468
Pral2076g00003 359 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Pral2076g00003 359 PIRSF ILK 9 354 - -
Pral2076g00003 359 CDD STKc_IRAK 74 347 - -
Pral2076g00003 359 SUPERFAMILY Protein kinase-like (PK-like) 44 344 IPR011009 -
Pral2076g00003 359 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2076g00003 359 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2076g00003 Pral-Chr2076 10560 13715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2076g00003 49 345 Receptor kinase-like Gene Family AT4G02010 48.173 5.08e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral2076g00003 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2076g00003 K13436 - gmx:547596 551.206