Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2074g00004 ATGTTGGATCTCAACGTCGATATGGAAGGTCCTCAGCCCCAAAGGGAAGAAGACTCTGGGTCTGGGACTTCCAATTCCTCTCTGCTGAATTTCGAAGAATCTCGAGACGAAGATTCTTCTGCTTTCGTATTCGACATACTGAAGAGAGAAACAGATTGCCGGGTTGAGGGTGAAGAGAAGGAAACGCTAGAAATCACGACAAGGCCACTTTTCCCTGTGAATAGTGATGACAAGGGACGCAGAGATTGTGATTTCCGATTGGGATTATCATGTTCGAGAAGTAATCAATGGCTAAACCTGTCATTTGCTGAGAGTGGTGCTGCTGGCACGCAAGCTGAATTGAGCGTGTTGCAGCAAAAGCAACCCCAAATCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGCTCACAGTACAGGGGTGTTACTTTCTACCGCAGAACTGGTCGATGGGAATCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGACACTGCACATACTGCCGCAAGAGCATATGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAAGTTTGAGCAAAGAGGAGTTTGTCCAAGTCCTTCGCCGCCAATGCTCCGGTATGCCAAGAGGGAGCTCAAAATATAGGGGTCTATCTCTCAACAAATGGGGTCAATGGGAAGCACAAACTAGCCCTTTCGTTGGCAAAAAGCTTTATGACAAGCTACCCATCAAGAGTGATGGAAGAGGATTGGTAACTAGCTTTGAGCCTAGCAAGGGAGAGAGAACTATTGAATCCAGCAGAGGAGGGAATTATCAAAATCTTGATTTGAGCCTTGGAATTTCTCCACCTTGTAATGAATCCAAGAAGAATGATGCTGCGAGAGGCCTTTCTCTTCGTTATACGGCTTGTGAGACACCAAACAAGGGAGGGCAAATGGCTGATAGCACTGGTGCTTCATTAATAAGGGGACAAGCCATTTATGGTGTGGAAATGCCATCTAAATATGACCAAATATGCTCTGGCTTGTATCCCGGTTATGTACAGGATTATGAGGAGAAGGCCATAGAAAAGAGAGCTGAAGTTGTTCCTCTATCAAGATTCCCAAATTTGGCTTGGCAACTTCACAGCAACGGCAGCATCGTGCCGGTGCCGGTTTCGGTTTTTCCCAATGCAGCATCATCAAAATTCAGTTCTTCTAGCAACAATGGTGGACCAGCCCCACATCCAATCAACCCATATCGTCATAACAATTCTACCCACAATTTGTGCTTCAGTTCAACACCAACATCCACGGTTAATGACTCCCCAAGTTGCGAGTCTTAG 1371 0.4566 MLDLNVDMEGPQPQREEDSGSGTSNSSLLNFEESRDEDSSAFVFDILKRETDCRVEGEEKETLEITTRPLFPVNSDDKGRRDCDFRLGLSCSRSNQWLNLSFAESGAAGTQAELSVLQQKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFSLSDYEEDMKMMKSLSKEEFVQVLRRQCSGMPRGSSKYRGLSLNKWGQWEAQTSPFVGKKLYDKLPIKSDGRGLVTSFEPSKGERTIESSRGGNYQNLDLSLGISPPCNESKKNDAARGLSLRYTACETPNKGGQMADSTGASLIRGQAIYGVEMPSKYDQICSGLYPGYVQDYEEKAIEKRAEVVPLSRFPNLAWQLHSNGSIVPVPVSVFPNAASSKFSSSSNNGGPAPHPINPYRHNNSTHNLCFSSTPTSTVNDSPSCES 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2074g00004 456 MobiDBLite consensus disorder prediction 118 137 - -
Pral2074g00004 456 Gene3D AP2/ERF domain 136 195 IPR036955 GO:0003700|GO:0006355
Pral2074g00004 456 CDD AP2 137 192 IPR001471 GO:0003700|GO:0006355
Pral2074g00004 456 MobiDBLite consensus disorder prediction 1 34 - -
Pral2074g00004 456 MobiDBLite consensus disorder prediction 410 430 - -
Pral2074g00004 456 SMART rav1_2 137 199 IPR001471 GO:0003700|GO:0006355
Pral2074g00004 456 SUPERFAMILY DNA-binding domain 136 194 IPR016177 GO:0003677
Pral2074g00004 456 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 107 307 - -
Pral2074g00004 456 MobiDBLite consensus disorder prediction 437 456 - -
Pral2074g00004 456 Pfam AP2 domain 137 185 IPR001471 GO:0003700|GO:0006355
Pral2074g00004 456 MobiDBLite consensus disorder prediction 16 30 - -
Pral2074g00004 456 FunFam AP2-like ethylene-responsive transcription factor 136 195 - -
Pral2074g00004 456 ProSiteProfiles AP2/ERF domain profile. 137 193 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2074g00004 Pral-Chr2074 126125 130605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2074g00004 1 429 AP2-EREBP Transcription Factor Family AT5G60120 38.285 2.22e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral2074g00004 AP2 6.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2074g00004 K09284 - tcc:18586321 375.941