Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2073g00004 ATGAATCCTTCTGATCTTCCCCAATGTTCCGTCTTCTTCTTCCTTCTGCTCCTACTTTTCGTTATCACAGTTCATGCCGATGATAGATTCACAAACTGCAGTAGCCACTTCAACTGTGGAATCGTCAACAACGTTGGGTATCCATTCTGGGGAGATAACAGGGCAGAATACTGTGGTCAGCCTGATTTCCATCTCGCTTGCCAACACAATACTCCAAAGTTGATCGTCAAATCTGTAACTTACAGGATTCTGAGTTTCGACCTCAATGATAAGAGACTCACAGTGGCCAGGGATGACTATTGGACAACTATATGTCCAACTCAACACATAAACACAAGCTTCGATTCCACCATGTTCAAGCTTTCTGATGGGTTTCGACAATTCGTCTTGCTTTATGATTGCAGCGACAGTTTTGATGCAATGAGTGACTCTATCAATTCATCAAGCACAGAGTGCTCCACTATTGACGGCTCGACGGAAGAAGTCTACTATGCGATCCTATCTTACAGTATTGATTTCACAAGATTTTGTGAGGTGGTTGTTGTTCCTATAACGAATGCCTTCGTTGATTTGGTACTTTACCATCGAAAGAAAATCGAAGAAGCAATAAAAGAAGGTTTTGGATTAAGTTGGAGCGTAAATAATGAAGAGTGCAACAAGTGTGTTAATTCTGGTGGGCAGTGCGGGCATAGTGATCAGAAGTTCACTTGTTTCTGCAGCAACGGAAGTCAAGGAACTGCGTCGTGTTCTTCATCATCATCAGAAACATCTCGAAATCGGATTAATATTATTGCAATTGTATCTGCCGGCGGTGGCGTTGGGATAGTGATAGTCTTGATCGCAATAATTGGTTGTCGTAGTGGATGTTTTAAATTAGGACAAAAGATTTCCAAGGAAAGAACATACGACGATCATCACCATGTTGAGACATTCGTGGAAACTTATGGCACTTTGGCACCCAGAAAATATACTTACTCGGAAGTGAGAAGAATTACAAAGTCATTCAAAACAAAAATTGGCCAGGGTGGTTATGGAACTGTGTACAAAGCCACTATGCCCGATGGTCGTCTTGTGGCAGTAAAAGTTCTCAGTGAGACCAAGGGCAATGGAGAAGAATTCATAAACGAAGTCGCAAGTATTAGCAGAACATCGCATGTAAATATAGTCACTTTGTTGGGATTCTGTTATGAGAAGAGCAAAAGAGCTTTGATCTATGAATTCATGCCCAATGGCTCATTAGAGAAGTTCATCTATAAAGGAGAATATTCCTTAAATCCAGTCTGTGATTTTGAATGGATGAGAATCTATCAAATTTCAATCGGTATTGCTCGAGGATTAGAGTACTTGCATCGAGGGTGTAACACAAGAATCCTACATCTTGATATCAAACCCCAAAATATCTTGTTAGATGAAGATTTTTGTCCAAAAATATCCGATTTTGGGCTCGCCAAGATATGTTACAAAAAGGAGAGTATTGTATCAATATCTGGCATGAGGGGAACTGCAGGATACATTGCACCAGAAGTCTTCAGTCGCACATATGGTGGAGTTTCATACAAATCTGATGTCTATAGTTATGGCATGTTAATCCTTGAAATGATCGGAGGAAGAAAGAATTTTGAGAGTGGAGGGTCACATGCTAATACTAGTGATGATATGTACTTTCCCAATTGGATTTATAAAGAATTTGAGCAATCCAATGTTGTTGCAACAAATGTGTCCATCACAGAAGAGGAAAAAGAAGTGGTAAGAAAGCTAAGTTTGGTTGGTTTATGGTGTATTCAGACAGATCCAGCAATGCGGCCATCAATGAGTAAAGTGGTTGAGATGTTAGAAGGACCCAATGAATCAGTGTCACTCCCACCAAAACCTTCTCTCTCTTCTCCTCATCCAAGGACACTGGCCCTTCATGCTTCAGATGTCTCCTCCTGCACCGGGCTTGATGATTCCAATTCCACGCCTATTCCAATGGAAACAACTGCATGA 1986 0.4089 MNPSDLPQCSVFFFLLLLLFVITVHADDRFTNCSSHFNCGIVNNVGYPFWGDNRAEYCGQPDFHLACQHNTPKLIVKSVTYRILSFDLNDKRLTVARDDYWTTICPTQHINTSFDSTMFKLSDGFRQFVLLYDCSDSFDAMSDSINSSSTECSTIDGSTEEVYYAILSYSIDFTRFCEVVVVPITNAFVDLVLYHRKKIEEAIKEGFGLSWSVNNEECNKCVNSGGQCGHSDQKFTCFCSNGSQGTASCSSSSSETSRNRINIIAIVSAGGGVGIVIVLIAIIGCRSGCFKLGQKISKERTYDDHHHVETFVETYGTLAPRKYTYSEVRRITKSFKTKIGQGGYGTVYKATMPDGRLVAVKVLSETKGNGEEFINEVASISRTSHVNIVTLLGFCYEKSKRALIYEFMPNGSLEKFIYKGEYSLNPVCDFEWMRIYQISIGIARGLEYLHRGCNTRILHLDIKPQNILLDEDFCPKISDFGLAKICYKKESIVSISGMRGTAGYIAPEVFSRTYGGVSYKSDVYSYGMLILEMIGGRKNFESGGSHANTSDDMYFPNWIYKEFEQSNVVATNVSITEEEKEVVRKLSLVGLWCIQTDPAMRPSMSKVVEMLEGPNESVSLPPKPSLSSPHPRTLALHASDVSSCTGLDDSNSTPIPMETTA 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2073g00004 661 FunFam S-receptor-like serine/threonine-protein kinase 302 407 - -
Pral2073g00004 661 Gene3D Phosphorylase Kinase; domain 1 307 407 - -
Pral2073g00004 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pral2073g00004 661 Pfam Wall-associated receptor kinase C-terminal 169 241 IPR032872 -
Pral2073g00004 661 Gene3D Transferase(Phosphotransferase) domain 1 408 620 - -
Pral2073g00004 661 ProSiteProfiles Protein kinase domain profile. 333 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2073g00004 661 CDD STKc_IRAK 339 613 - -
Pral2073g00004 661 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Pral2073g00004 661 Pfam Protein kinase domain 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2073g00004 661 MobiDBLite consensus disorder prediction 638 661 - -
Pral2073g00004 661 SUPERFAMILY Protein kinase-like (PK-like) 311 612 IPR011009 -
Pral2073g00004 661 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Pral2073g00004 661 SMART serkin_6 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2073g00004 661 PANTHER RUST RESISTANCE KINASE LR10-RELATED 305 628 IPR045874 GO:0004672
Pral2073g00004 661 FunFam PR5-like receptor kinase 408 622 - -
Pral2073g00004 661 MobiDBLite consensus disorder prediction 612 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2073g00004 Pral-Chr2073 14259 17500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2073g00004 10 645 Receptor kinase-like Gene Family AT1G66910 40.299 1.44e-152 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral2073g00004 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2073g00004 - - pcin:129293521 626.32