Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2073g00001 ATGAAAAGAAGGAAAAGAAAAGTTGAACAGTTGAAAAGCAATAAGAACCTCTTGTCGCCATCATTAAGCAATATTAATGGCGGTGTGACAACCTCTACAACTGCAAATAGTATGGCTCAAACTGCTCCTTCTTACCAAACCTCCAAGCTTGACTCTGCGCAGAAGAGTTTTTACTTTGGAGTTCAAGTTTTTAACTATGCTGAACTAGAAGAAGCTACCAAAAATTTTGACCCTTCCATGGAACTTGGTGATGGAGGCTTTGGAACTGTTTATTATGGAACCCTTAAAGACGGACGTGTGGTGGCAGTAAAACGCCATTATGAAAGCCATGCGAAACGTGTAGATCAGTACATGAATGAAGTCGAGATCCTAGCTCGCTTACGACATGACAACCTCGTAGCACTGTATGGATGTACCTCCAGACACAGTCGAGAACTCATCCTTGTCTATGAGTACATTTCTAATGGAACAGTCGCCGACCATCTCCATGGCAAACTATCTCGCTCATCTTTGCTTCCTTGGCCTATACGCATGAACATAGCAGTAGAAACAGCCGAAGCCTTAGCCTACCTTCACGAATCAGATGTCATACACCGAGACGTCAAAACCAACAACATTCTCCTAGACAACAATTTCCGAGTTAAGGTTGCTGATTTTGGTCTCTCACGTTTGTTTCCTAATCATGTCACACATGTTTCTACTGCTCCACAAGGCACACCTGGTTATGTCGATCCTGAGTATTATCAGTGCTATCAGTTAACTGATAAGAGTGATGTTTATAGTTTTGGGGTGGTATTAATCGAGCTCATATCATCCTTACAAGCTGTGGATGTAACTAGGAATCATCGTGACGTAAACTTAGCCAACATGGCTGTGGATAGGATTCAGAATAATGCAGTGGATGAGTTGGTTGATCCATATTTAGGGTTCAAAACGGACAATGCTGTGAGGAAGATGACTACCGGAGTAGCAGAATTAGCTTTCAGGTGTTTGCAGAAGGAGAGAGATATGAGACCTTCCATGAAAGAGGTGATTGAGGTCTTGAGAGAGATCCAAGGTAAGGAGTATAACGTGAAGGACAAGGAAGTGATGAAGATGATGGGTAAGGCAGAAGAAATGGTGCTTTTGAAAAATTGCAGTGCACCAGTTTCACCAAATTCGGTTTCTGATAAATGGGTTAGCTTCTCTTCTGCGTCTAACTCCTCACAGAATCTATCATCTCCTAATTATTCTGTTGGTAAGACTTAG 1248 0.4207 MKRRKRKVEQLKSNKNLLSPSLSNINGGVTTSTTANSMAQTAPSYQTSKLDSAQKSFYFGVQVFNYAELEEATKNFDPSMELGDGGFGTVYYGTLKDGRVVAVKRHYESHAKRVDQYMNEVEILARLRHDNLVALYGCTSRHSRELILVYEYISNGTVADHLHGKLSRSSLLPWPIRMNIAVETAEALAYLHESDVIHRDVKTNNILLDNNFRVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLIELISSLQAVDVTRNHRDVNLANMAVDRIQNNAVDELVDPYLGFKTDNAVRKMTTGVAELAFRCLQKERDMRPSMKEVIEVLREIQGKEYNVKDKEVMKMMGKAEEMVLLKNCSAPVSPNSVSDKWVSFSSASNSSQNLSSPNYSVGKT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2073g00001 415 SMART serkin_6 76 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2073g00001 415 SUPERFAMILY Protein kinase-like (PK-like) 56 352 IPR011009 -
Pral2073g00001 415 Pfam Protein kinase domain 79 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2073g00001 415 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Pral2073g00001 415 ProSiteProfiles Protein kinase domain profile. 76 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2073g00001 415 MobiDBLite consensus disorder prediction 396 415 - -
Pral2073g00001 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Pral2073g00001 415 FunFam receptor-like protein kinase FERONIA 37 152 - -
Pral2073g00001 415 MobiDBLite consensus disorder prediction 13 29 - -
Pral2073g00001 415 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 397 IPR044652 GO:0004672
Pral2073g00001 415 MobiDBLite consensus disorder prediction 1 29 - -
Pral2073g00001 415 FunFam Wall-associated receptor kinase-like 20 153 361 - -
Pral2073g00001 415 Gene3D Phosphorylase Kinase; domain 1 45 152 - -
Pral2073g00001 415 Gene3D Transferase(Phosphotransferase) domain 1 153 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2073g00001 Pral-Chr2073 512 2658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2073g00001 44 402 Receptor kinase-like Gene Family AT1G25390 58.311 1.33e-150 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral2073g00001 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2073g00001 - - mtr:11435688 538.88