LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2072g00003	ATGGAGGATGGACGTGATCGCCCCATTCTGCTTCCGCCGCCCAATTTCTCGATGGTCGAGGACAACATTTTTCGATCCAGTTTTCCTCGACCTCCCCATTTCCCCTTCCTTCAAACCCTAAATCTTCGATCTATCATATACTTGTGTCCTGAACCATATCCGCAGGAAAATGTGGAATTTCTTCGGTCACAGGACATTCGACTCTTTCAGTTTGGAATCGAGGGAAAGACGGAGGTTTCAGTACCGATTCTGAAGGATACTGTCATGGATGCTCTGAAAGTCTTACTTGATGTGAGAAATCACCCTCTTTTAATCCATTGCAAACAAGGAAAGCATCGAACAGGTTGCCTGGTGGGTTGCTTGAGAAAATTGCAGAAGTGGTGTTTGTCTTCAGTGTTTGAGGAGTACAACAGATTTGCTGGTGCCAAATCGAGGATGGCGGATTTAAGATTCATAGAATCGTTTGATATATTATGCCTGAGGCATTGCCTTTACAGTATTATATACCAGTACCAAGGATATAATTCAACCAAGAGGCGGTTGTTGTATAAAGAAGAGAATTTACAGAAGCCCCAAATGACATCCGTATAG	591	0.4332	MEDGRDRPILLPPPNFSMVEDNIFRSSFPRPPHFPFLQTLNLRSIIYLCPEPYPQENVEFLRSQDIRLFQFGIEGKTEVSVPILKDTVMDALKVLLDVRNHPLLIHCKQGKHRTGCLVGCLRKLQKWCLSSVFEEYNRFAGAKSRMADLRFIESFDILCLRHCLYSIIYQYQGYNSTKRRLLYKEENLQKPQMTSV	196

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2072g00003	196	ProSitePatterns	Tyrosine specific protein phosphatases active site.	105	115	IPR016130	GO:0016311\|GO:0016791
	Pral2072g00003	196	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	11	156	IPR029021	-
	Pral2072g00003	196	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	15	180	IPR020422	GO:0006470\|GO:0008138
	Pral2072g00003	196	PANTHER	TYROSINE-PROTEIN PHOSPHATASE	10	169	-	-
	Pral2072g00003	196	FunFam	probable tyrosine-protein phosphatase At1g05000	9	159	-	-
	Pral2072g00003	196	Gene3D	Protein tyrosine phosphatase superfamily	9	159	IPR029021	-
	Pral2072g00003	196	CDD	PFA-DSP_Siw14	10	156	-	-
	Pral2072g00003	196	PRINTS	Plant and fungal dual specificity phosphatase signature	47	60	IPR020428	GO:0016791
	Pral2072g00003	196	PRINTS	Plant and fungal dual specificity phosphatase signature	10	27	IPR020428	GO:0016791
	Pral2072g00003	196	PRINTS	Plant and fungal dual specificity phosphatase signature	66	80	IPR020428	GO:0016791

Showing 1 to 10 of 12 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2072g00003	Pral-Chr2072	13130	15259	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2072g00003	3	192	Protein tyrosine phosphatase (PTP) family	AT3G02800	67.368	5.48e-97	278

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2072g00003	K18045		-	qsa:O6P43_007759	315.849

Showing 1 to 1 of 1 entries