Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2070g00010 ATGCAAAATCCCAGGTCAGAGAAGCTAGAATTTCTCCAGAAATGGATGGAGGGTATGGGAAAATGCACGTCCCTTAAGAAGAACATGAGCTTGTTAGAGAGGAAGAAGGCCATAAAAGTGTCAGCAGATTTAGCCATGGCTTCCACCAGAACTGAAAGCAAGTGTTGGAGCCGAGCCCTCATTGCCAATATTGCTTCCAGAGACCATAACAGCAAAGTCCTGACGGAGCACGTAATAGGCTCCTCGCAGTGCTTAAGGCTAAGAAAGGCTTTCACTTCTTCTTCATTTTCTCAGCTTAAGAACAAGAGGATGCTTAATAGAACCAGGAAGATCATGAAGAGAAGGCGCCGTACAGTTCGTAGTAGAGTGAAGAAAGTAGTGATGGCGGATTCTATTGCAAGGAGGCTGGTCCAAAAGAGAACAGAAATGCTAAAGAGGCTTGTTCCAGGTGGCGATCTTATGGACGATGATGTGTCCTTGATTGAAGAAACCCTAGATTATATTCAATCCCTCCGATCTCAGGTTCAAGCAATGCGCTGTCTTCTCGCCACTTCCCAGCTCATGAATTGTTCCTAA 576 0.4531 MQNPRSEKLEFLQKWMEGMGKCTSLKKNMSLLERKKAIKVSADLAMASTRTESKCWSRALIANIASRDHNSKVLTEHVIGSSQCLRLRKAFTSSSFSQLKNKRMLNRTRKIMKRRRRTVRSRVKKVVMADSIARRLVQKRTEMLKRLVPGGDLMDDDVSLIEETLDYIQSLRSQVQAMRCLLATSQLMNCS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2070g00010 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 179 IPR036638 GO:0046983
Pral2070g00010 191 CDD bHLH_AtIBH1_like 135 182 IPR044549 GO:0006355
Pral2070g00010 191 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 182 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2070g00010 Pral-Chr2070 87793 88597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2070g00010 1 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 38.947 7.74e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2070g00010 - - pcin:129309973 258.455