Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2069g00002 ATGGAACCAGGCGCTCCTCCGCCGCCTATGCCGCCGCCACTCCCGTCACCTCCGGCATCACCCTCTCCCTCATCCTCTGCCGTCACCATCCTCGGAAAGTACCAGTTGATCCGTCTCCTAGGTCGCGGCAGCTTCGCCAAGGTTTACCAGGCTCGATCCTTAATCGACGGCTCCATCGTCGCCGTGAAAATCATTGACAAGTCGAAAACTAATGCCTCCATGGAGCCTCGGATTGTTCGTGAGGTCGATGCAATGCGACGGCTTCACGACCACCCTCATATTCTTAAAATCCAAGAGGTTTTGGCTACGAAGACGAAGATCTACCTGATTGTGGAGTTCGCTGCCGGCGGGGAGTTATTCTCCAAGATCTCGCGTAAAGGCCGGATGACGGAGGCGGTGGCTCGGCGGTACTTCCAGCAATTGGTTTCCGCCCTCTGTTTCTGCCACAAAAACGGCGTCGCACACCGTGATCTGAAGCCTCAGAATCTTCTCTTGGACCACGAAGGGAATCTGAAGGTCTCCGATTTCGGACTCTCCGCCTTACCTGAACAGCTTAAAAACGGGTTGCTCCACACGGCTTGTGGCACGCCGGCTTATACCGCGCCGGAGATCCTCCGCCGGCGCGAATACGAAGGCTCGAAAGCCGACGCGTGGTCGTGCGGGCTTATACTCTACGTACTGCTCGCCGGCTACCTCCCGTTCTCCGACGCCAACATCCCTGAGATGTGCAAGAAGATCAGCCGGCGAGATTACCAGTTCCCGGAGTGGATATCCAAGCCGGCGCGTTTCGTGATTAACCGACTACTCGACCCGAACCCGAAGAATCGGATGAGTCTAGAATCTCTCTATCAAAACTCTTGGTTCAAGAAATCGCTCAAGCCCCAACCCGACGAGAGCTTATTCGAGTCGGGTCCCACCGCGAAATCGTATCAAAAGCTCGAGAGGATGGGTTCGGGCGTGAACGCCTTCGACATAATCTCCATGTCATCAGGTCTGGACCTGACGGGGTTGTTCGAAACGACGTCGGACAACAGGAGAGAAAAGAGATTCACATCGAAAGCTTCAATGAAAGCAGTGGAAGAGAAAGTGAAGGAAGTAGGAGGAATTTTAGGGTTCAAAGTCGAGATAAGTAAGAACGGAGCTATTGGCTTAGGGAAAGGAAAGGTGGTTCTTGTTGTGGAGGTGTTTGAAGTAGTTCCTGAGCTGTTGATGGTGACAGTGAAAGTGATGAATGGTGGGTTTGAGTTTGATGAGGTCCACTGGGGAGACTGGAAATCTGGGCTTCAGGATGTTGTCCTTTCATGGCACAATGAATCGCTGTGA 1323 0.5344 MEPGAPPPPMPPPLPSPPASPSPSSSAVTILGKYQLIRLLGRGSFAKVYQARSLIDGSIVAVKIIDKSKTNASMEPRIVREVDAMRRLHDHPHILKIQEVLATKTKIYLIVEFAAGGELFSKISRKGRMTEAVARRYFQQLVSALCFCHKNGVAHRDLKPQNLLLDHEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILRRREYEGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKKISRRDYQFPEWISKPARFVINRLLDPNPKNRMSLESLYQNSWFKKSLKPQPDESLFESGPTAKSYQKLERMGSGVNAFDIISMSSGLDLTGLFETTSDNRREKRFTSKASMKAVEEKVKEVGGILGFKVEISKNGAIGLGKGKVVLVVEVFEVVPELLMVTVKVMNGGFEFDEVHWGDWKSGLQDVVLSWHNESL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2069g00002 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Pral2069g00002 440 Pfam NAF domain 320 375 IPR004041 GO:0007165
Pral2069g00002 440 FunFam Non-specific serine/threonine protein kinase 19 115 - -
Pral2069g00002 440 Gene3D Kinase associated domain 1, KA1 317 433 - -
Pral2069g00002 440 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2069g00002 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 28 408 - -
Pral2069g00002 440 FunFam Non-specific serine/threonine protein kinase 316 433 - -
Pral2069g00002 440 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Pral2069g00002 440 MobiDBLite consensus disorder prediction 1 24 - -
Pral2069g00002 440 CDD STKc_AMPK-like 33 287 - -
Pral2069g00002 440 Gene3D Phosphorylase Kinase; domain 1 22 115 - -
Pral2069g00002 440 FunFam Non-specific serine/threonine protein kinase 24 316 - -
Pral2069g00002 440 MobiDBLite consensus disorder prediction 1 22 - -
Pral2069g00002 440 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Pral2069g00002 440 SUPERFAMILY Protein kinase-like (PK-like) 30 296 IPR011009 -
Pral2069g00002 440 SMART serkin_6 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2069g00002 440 ProSiteProfiles Protein kinase domain profile. 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2069g00002 440 Gene3D Transferase(Phosphotransferase) domain 1 116 307 - -
Pral2069g00002 440 CDD CIPK_C 321 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2069g00002 Pral-Chr2069 36769 38541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2069g00002 14 438 Miscellaneous Gene Families AT3G23000 56.452 1.83e-164 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral2069g00002 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2069g00002 K12761 - gmx:100784173 603.208