Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2062g00005 ATGGAAATGGAGGATCACCATCGTCCGCATCAACATCCGCAGCAACATCTTGAGTATGGTACTATGGGGGATCTCCGGCACCTTATGAATGCACCGAGGTCGCTCTCGGCGGACCTCTTCCCGGCTCACCCGAATTTGACGCCCACCCACCACTACGACGCCTTGTCTTTTGGTCGTCATCAACTGATGGCTGATATAATGCCTCGCGGCCTTCACGATTCTTCTGCTCTTAATACTAGCATTTCCGTGGCCACTCCCGCTGCCGCCGCCAGTACTCCCACGTTCAGTGCCTTTGAGGCAGACACTTCTGGGGGTTTCCCCGGAGACGCCTCCACCGCACGATGGCCCAGACAGGAAACTCTAACACTTCTTGAGATCAGATCTCGTCTTGACTCTAAGTTCAGACACGCCAATCAGAAGGGCCCCTTATGGGATGAACTTTCTAGAATCATGGCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAATTCGAAAACTTGTATAAATATTACAAGAAAACAAAGGAAGGCAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTTCGCCAACTTGAAGCCTTATATGGAGAAAGCAACAACCCAACCTCAGTCCAAGAAACCAATTTGGGTGGCAACAGTCTTCACTTTCACACCCCCTCCCAAACAAACCAAGACATTTTTAATAGGCACTGTGATAGCGTGAGCCTCACTAATAACTCCACTGAGGTGGACACATCATCATCGGATGAAAATGATTCAATGGAGAAGAGGAGAAAGAGAAGAGGAAGAAGCTGGAAAGTAAAGATAAAAGAGCTGATCGATTCGGAGATGAAGAAGGTGATGGAGAAGCAAGAGGCATGGTTGGAGAGATTAATGAAGACACTGGAGGAGAAGGAAAAGGAGAGGGCACTGAGAGAGGAAGAATGGAGTAGACAAGAGGCAGCCAGGTTAGATAATGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGATGCAGCTTTAATGGACGCATTGCAAAAATTAACAGGAAGAGAAATAAGGGCTGGTGATCCAACTACTGCTGATATTCAAAATTACAGCGAAAACCAGAATGAAGATGGAAGTGAAATACTACATAGCACTGACAGAGTTGGTGAAAGTTGGACAGAATCTGAGATCACTACTCTCTTTCAGGTGAGAGCTGAGGTGGAATCCAGGTTTGGGCAAAGTGGGTGTCCGGAGGAGGTTCTGTGGGAGGAAGTTGCCAACAAAATGACTTGTTTTGGCTACCATAAAGCTGCTTCCGTGTGCAAAGACAAGTGGGAAAGTATCAGAAGCTATTACAAGAAGCGCAAGCAAAATTCTGCTAGTTTTTACTTGGAAACCAATAATCAGTCACCCCTATATAATCAAGCAAGTGTTTATTGTGATGTCAACCAACAGCGGCAGATTGGTTCTTCACCTTCAAATTCTAACGTTGGCAATGCTGCTAGGGCTGATAGTTGTTTTCCCTTGTTTATGTGTGAAGGAGAAAATATGTGGGAAAATTTCGGCTTAAAGTTCAACAAAGGAAACCAAAACCCGTGA 1596 0.4574 MEMEDHHRPHQHPQQHLEYGTMGDLRHLMNAPRSLSADLFPAHPNLTPTHHYDALSFGRHQLMADIMPRGLHDSSALNTSISVATPAAAASTPTFSAFEADTSGGFPGDASTARWPRQETLTLLEIRSRLDSKFRHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGESNNPTSVQETNLGGNSLHFHTPSQTNQDIFNRHCDSVSLTNNSTEVDTSSSDENDSMEKRRKRRGRSWKVKIKELIDSEMKKVMEKQEAWLERLMKTLEEKEKERALREEEWSRQEAARLDNEHKFWAKERAWIEARDAALMDALQKLTGREIRAGDPTTADIQNYSENQNEDGSEILHSTDRVGESWTESEITTLFQVRAEVESRFGQSGCPEEVLWEEVANKMTCFGYHKAASVCKDKWESIRSYYKKRKQNSASFYLETNNQSPLYNQASVYCDVNQQRQIGSSPSNSNVGNAARADSCFPLFMCEGENMWENFGLKFNKGNQNP 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2062g00005 531 MobiDBLite consensus disorder prediction 243 266 - -
Pral2062g00005 531 CDD GT1 391 455 - -
Pral2062g00005 531 FunFam Trihelix transcription factor GT-2 391 453 - -
Pral2062g00005 531 Coils Coil 284 314 - -
Pral2062g00005 531 CDD GT1 114 179 - -
Pral2062g00005 531 Pfam Myb/SANT-like DNA-binding domain 114 200 IPR044822 -
Pral2062g00005 531 Pfam Myb/SANT-like DNA-binding domain 390 458 IPR044822 -
Pral2062g00005 531 Gene3D - 391 453 - -
Pral2062g00005 531 Gene3D - 115 177 - -
Pral2062g00005 531 PANTHER FI21293P1 89 493 - -
Pral2062g00005 531 ProSiteProfiles Myb-like domain profile. 383 448 IPR001005 -
Pral2062g00005 531 ProSiteProfiles Myb-like domain profile. 107 172 IPR001005 -
Pral2062g00005 531 FunFam trihelix transcription factor PTL-like 115 177 - -
Pral2062g00005 531 SMART sant 387 450 IPR001005 -
Pral2062g00005 531 SMART sant 111 174 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2062g00005 Pral-Chr2062 26149 28615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2062g00005 15 526 Trihelix Transcription Factor Family AT5G03680 43.529 1.09e-134 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral2062g00005 Myb_DNA-bind_4 3.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2062g00005 - - pcin:129306756 945.651