Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2062g00004 ATGTTTGGCAGCAGCGGAAGCAAATCTTCCACTGGGCGCCACCCCGTTTACAAGGGAGTGAGGCGTAGGAGCAGCGGAAAATGGGTGTCTGAAATTCGGGAGCCCAAGAAGCCCAACCGGATTTGGTTAGGCACGTTCCCTACCCCTGAAATGGCCGCAGTCGCCTACGACGTCGCCGCCCTTGCTCTTAAGGGTGAGCACGCCGACCTCAACTTCCCCGACTCTGCTTCTTCCCTGCCCGTCCCCGCGTCCACGTCTCCCTCTGACATTCAGATGGCTGCAGCCAGCGCTGCCGCCGCCGCCGGGGCTGCTAAGGATGCTTTATCTGCGGCCACCGGCGAGTCGTCTTCTTCAGTGTCACTGAAAGAGAACGAAGCGGGAGCGGCGGAGGAGTTTGTGGATGAGGATTTGATCTTTGATATGCCAAATGTGCTGCTCAATATGGCTGAAGGAATGATGCTCGCTCCTCCTCCACTGAACTGGGATGCTGCTGCTCCCCCAGATTACACGTCTCAGGATCCATACCTTTGGAACTTCCGCCCCTAA 546 0.5788 MFGSSGSKSSTGRHPVYKGVRRRSSGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAALALKGEHADLNFPDSASSLPVPASTSPSDIQMAAASAAAAAGAAKDALSAATGESSSSVSLKENEAGAAEEFVDEDLIFDMPNVLLNMAEGMMLAPPPLNWDAAAPPDYTSQDPYLWNFRP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2062g00004 181 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 8 178 IPR045277 GO:0003700
Pral2062g00004 181 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Pral2062g00004 181 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Pral2062g00004 181 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Pral2062g00004 181 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Pral2062g00004 181 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Pral2062g00004 181 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Pral2062g00004 181 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Pral2062g00004 181 Gene3D AP2/ERF domain 16 74 IPR036955 GO:0003700|GO:0006355
Pral2062g00004 181 MobiDBLite consensus disorder prediction 1 29 - -
Pral2062g00004 181 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2062g00004 Pral-Chr2062 13616 14171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2062g00004 7 179 AP2-EREBP Transcription Factor Family AT2G36450 63.687 8.64e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral2062g00004 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2062g00004 - - gmx:100799620 222.631