Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2061g00009 CTTCAGCCACTGGAGTCTCGTGGATTTGATCTCTCTAAGGATCATAAGAATGAGCAGGTTTCTAGCAAAGATCAAGTGTTACAACTTACGCGAGAAGAAGAAAAGGAGATTGGAGATGTTGGGTGGAAGCCATTCTTGGATTATCTTTATCTCTCCAAAGGATCATTGCTTATGTCTCTGATCATTTTAGCACAGGTGGCTTTTATTGGTTTGCAAGCAGCATCAACCTTTTGGCTTGCTCTGGCCATTGAAGTACCAAAAGTAACAAATGGCATCTTGATTGGGGTTTACACATTAATCTCACTTCTAAGTGTTGGCTTTGTGTGGCTAAGATCTATCATGGGGGCCCACCTTGGATTAAAAGCTTCTGCTTGTTTCTTCTCTGGTTTCAATAATGCTATCTTCAAGGCTCCTATGCTGTTCTTTGACTCAACCCCAGTAGGAAGAATTTTGACCCGAGCTTCGTCAGATTTGAGTACGTTAGACTTTGATATACCTTATGGACTCACCTTTTCAGCAGGTGGTGCAATAGAACTTCTGACAATAATTGCAATAATGGTTTCAGTCACGTGGCAAGTACTTATTGTTGCAGTTCCCGCCTTAATAACTTCCAAATACATTCAGGGCTATTACCAAGCCTCTGCTAGGGAACTAATGAGAATCAATGGAACCACCAAAGCTCCGGTTATGAATTTCACCGCGGAGACATCATTAGGAGTGGTGACTGTGAGAGCTTTCAACATGGCAGATAGATTTTACCAAAATTACCTCAAGCTTGTGGACACAGATGCAAAACTATTCTTTCATTCTAATGTGGCCACAGAATGGTTAATTTTAAGGATTGAAATACTTCAGAACTTGACACTCTTCACGGCAGCTTTGCTGCTTGTTCTACTTCCAAAGGGACTTATGCACCCAGGCCTTGCAGGACTCTCTCTATCATATGCTTTGTCATTGACAATATGCGTAACTTTTATGAGTCGTTGGTTCTGCAACTTATCAAATTATATTGTTTCCGTTGAAAGAATCAAACAGTTCATTCACATACCAGAAGACCCACCTGCAGTTGTGGAGAACAGAAAACCTCCACCTTCATGGCCTTCCAATGGTAGGATTGAGCTTCAAAACCTTGAGATAAGGTATCGTCCAAATGCTCCATTAGTCCTTAAGGGAATCACTTGCGCATTCAAAGAAGGGAGTAGAGTGGGAATTGTAGGGAGGACTGGGAGTGGGAAAAGTACACTAGTAAGTGCTTTGTTTCGATTGGTTGATCCTGCAAGAGGTGATATTCTTATAGATGGGATCAGCATATTACCAATGGGGTTGAAGGATTTGAGGATGAAGCTGAGCATTATTCCTCAAGAACCCACTCTTTTTAGGGGTAGCATTAGAACCAACTTGGATCCTCTTGGCCTCTACTCTGACGAAGAAATCTGGGAGGCTTTAGAGAAATGCCAGCTCAAGTCAACAATCAGCAGGCTACCCAATCAATTGGACTCTTCTGTGAATGATGAAGGTGAAAATTGGAGTGTAGGACAACGTCAGCTCTTATGCCTAGGAAGAGTACTTCTGAAGCGAAATAAGATTCTTGTTCTTGATGAAGCCACTGCTTCCATTGATTCTACCACAGATGCCATCCTGCAGCAAGTTATTAGACAAGAATTTGCAGGGTGCACAGTTATAACTATAGCCCATCGAGTCCCAACTGTAACAGACAGTGATATGGTTATGGTCCTCTCTTCTGGGAAAGTGGTGGAATATGATGAGCCTTCAAAGCTTATGGAGACAAACTCTTCTTTCTCTAAACTTGTTGCTGAGTATTGGTCCAGCCGCAACCAGAACCGCTCCTAA 1851 0.423 LQPLESRGFDLSKDHKNEQVSSKDQVLQLTREEEKEIGDVGWKPFLDYLYLSKGSLLMSLIILAQVAFIGLQAASTFWLALAIEVPKVTNGILIGVYTLISLLSVGFVWLRSIMGAHLGLKASACFFSGFNNAIFKAPMLFFDSTPVGRILTRASSDLSTLDFDIPYGLTFSAGGAIELLTIIAIMVSVTWQVLIVAVPALITSKYIQGYYQASARELMRINGTTKAPVMNFTAETSLGVVTVRAFNMADRFYQNYLKLVDTDAKLFFHSNVATEWLILRIEILQNLTLFTAALLLVLLPKGLMHPGLAGLSLSYALSLTICVTFMSRWFCNLSNYIVSVERIKQFIHIPEDPPAVVENRKPPPSWPSNGRIELQNLEIRYRPNAPLVLKGITCAFKEGSRVGIVGRTGSGKSTLVSALFRLVDPARGDILIDGISILPMGLKDLRMKLSIIPQEPTLFRGSIRTNLDPLGLYSDEEIWEALEKCQLKSTISRLPNQLDSSVNDEGENWSVGQRQLLCLGRVLLKRNKILVLDEATASIDSTTDAILQQVIRQEFAGCTVITIAHRVPTVTDSDMVMVLSSGKVVEYDEPSKLMETNSSFSKLVAEYWSSRNQNRS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2061g00009 616 FunFam ABC transporter C family member 3 355 606 - -
Pral2061g00009 616 FunFam ABC transporter C family member 5 21 353 - -
Pral2061g00009 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 605 IPR027417 -
Pral2061g00009 616 SMART AAA_5 398 591 IPR003593 GO:0016887
Pral2061g00009 616 CDD ABCC_MRP_domain2 370 590 - -
Pral2061g00009 616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 606 IPR003439 GO:0005524
Pral2061g00009 616 Pfam ABC transporter transmembrane region 68 316 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2061g00009 616 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 15 612 - -
Pral2061g00009 616 Gene3D ABC transporter type 1, transmembrane domain 21 352 IPR036640 GO:0005524|GO:0016020
Pral2061g00009 616 SUPERFAMILY ABC transporter transmembrane region 45 354 IPR036640 GO:0005524|GO:0016020
Pral2061g00009 616 Gene3D - 355 606 IPR027417 -
Pral2061g00009 616 Pfam ABC transporter 389 537 IPR003439 GO:0005524
Pral2061g00009 616 CDD ABC_6TM_ABCC_D2 54 347 IPR044726 GO:0140359
Pral2061g00009 616 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 60 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2061g00009 Pral-Chr2061 87886 91055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2061g00009 165 604 Calmodulin-binding Proteins AT2G36910 26.339 1.24e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2061g00009 - - gmx:100784827 903.279